| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_1606 |
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| Symbol | |
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| ID | 4018081 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 1870042 |
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| End bp | 1870965 |
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| Gene Length | 924 bp |
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| Protein Length | 307 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637955616 |
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| Product | MscS mechanosensitive ion channel |
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| Protein accession | YP_562613 |
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| Protein GI | 91792962 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3264] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.696801 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGCTTAG ATTCGATATT AGAAGCATTG GCTTTTGTGG TGTACACCTA TGACGGCCGC
CCAATTACCT TACTACAAAT CCTGCAGGTG CCTTTTTATA TCTTAATGGC CTGGTTTATC
GTGGGTCACA TAGGCAAGTT AATCAAGCGA GGACTGCGGG CTCGTAATGT CAGTGCTGAT
GCTATCCACT TCTTTTCTCG GGTCTACTTA GTGCTGACTA TAGCTATACT TGTGGTCACC
AGCATGGAGA TTTTAAATAT CCCCTTAACG GCCTTTGCCT TCGTGTCCGG TGCTATCGCC
ATTGGTGTGG GTTTTGGTGC CCAGAACATT ATTAATAACT TTATCAGTGG TTGGATCTTG
ATGTGGGAGC GCCCCATACG CATTGGCGAC TTTCTTGAAG TGGGTGATGC TCGCGGCGTG
GTGGAAAGCA TCAACACCCG TTCAACCTTA ATTCGCCGCA ATGATGGCGT GCACATGCTG
GTGCCGAATA GTCAGTTACT GGAAAATACC GTCACCAACT GGACCTTAAT CGATCAAAAT
GCCCGCTCAT TTGTGCGTGT CGGTGTGGCT TATGGCTCAG ATGCACTTCA GGTTCGTGAA
TTAATCTTTC AAGTGCTTAA CGAGCGTGAT GACATTTTAG AAATTCCGCC AGCCTCGGTA
TTTTTTGAAG ATTTTGGTGA TAACGCGCTG ATTTTCGATG CGGTGTTTTG GGTTAGCGCA
GTATCAGAAA CTGATATCCG TCGCCGTCGC AGTGAAATAC GTTTTCGCAT GTATGAACTG
TTTAATGAAA ACAATATCTC CATAGCCTTC CCGCAGCGCG ATGTGCATTT AGACGGTAAC
TTAACCATTA CCAATGCAAG CCAAGCGACA GGGAACAATC AAACAGCCCC TCAACAAGCG
GCTCAGCCTA AAGCGGATTT ATGA
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| Protein sequence | MSLDSILEAL AFVVYTYDGR PITLLQILQV PFYILMAWFI VGHIGKLIKR GLRARNVSAD
AIHFFSRVYL VLTIAILVVT SMEILNIPLT AFAFVSGAIA IGVGFGAQNI INNFISGWIL
MWERPIRIGD FLEVGDARGV VESINTRSTL IRRNDGVHML VPNSQLLENT VTNWTLIDQN
ARSFVRVGVA YGSDALQVRE LIFQVLNERD DILEIPPASV FFEDFGDNAL IFDAVFWVSA
VSETDIRRRR SEIRFRMYEL FNENNISIAF PQRDVHLDGN LTITNASQAT GNNQTAPQQA
AQPKADL
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