| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_1587 |
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| Symbol | |
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| ID | 4018062 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 1844711 |
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| End bp | 1847770 |
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| Gene Length | 3060 bp |
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| Protein Length | 1019 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637955597 |
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| Product | acriflavin resistance protein |
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| Protein accession | YP_562594 |
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| Protein GI | 91792943 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.268577 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTGAGA ATCATTATCC CCCCCGCGTG ACAGACATGT TTGTCACTCG GCCAATTTTG
GCGATTATCT TATCGCTGAC CTTAGTCATA GTGGGCGCCA TAGCGGCGAT GAAGCTGCCT
GTGCTGCAAT ATCCACAAAT TGAAAGCTCG TCCTTGGTGA TTAGTACCGT TTACGTGGGC
GCGTCGGCCG AAGAAATTCA AGGCTTTGTT ACCGATCCCA TCGAAAAAGC GGCGGCCACT
ATCACAGGGG TTGATTTTAT CAGCTCTGAA TCTAAGGCCA GCAGCAGCAG TCAAGTGACC
ATACAGCTTG CGCTCAATGC TGACAGCACT AAAGCCTTGG CTGAGCTTAA TACTCGCTTG
AGTCAAATTC GCTTTGAATT GCCCCAAGAA GCCCAAGACC CCAGTATCAC TGTGGTGCGT
GCCGACAGGC CCTATGCCTC ATTTTACCTG TATGCGGATA CCCAAGATTT CAGCCGCGCT
GAACTCAGTG ATTATTTAGA GCGTCAGGTG AACCCTTTAC TGAACTCCTT ACCTGGAGTG
CAAAAGGTCG GCCTTGAAGG CGGCCGCTCC CCTGCGATGC GCATCTGGCT TAATCCGACG
AAAATGTCGA TGCTAAAAGT CAGCACTAAT GATATTCAGC AGGCACTATT GCGCAATAAC
GTCGCCGCCA CCATAGGCAA TACTGAAAAT CCAACCCAGC GCATCGATTT AGTGGCCAAT
ACCTTGCTTA CCGACAAGGC GAGCTTTGAC AATATCACCA TCAAGGACGT GGATGGTCGC
AGTATTAAAC TCATCGATAT TGCCAAGGTA GAACTCGGCG CCGAGCAAGC CACAGCTGAG
GCAGGTTACA ACCTGACTAA CTCAGTATAC GTGTCTATTT ATACCCAGCC AGGGGCCAAT
GAAATTGATA TTGGTGACAA GTTGTATGAA AAGTTAGCCA GTCTAAACCA AGGTTTACCG
AAAGATCTGC AATTGAAGAT GGCCTATGAT GCCACTCAAT ACATGCGAGA CTCCATCAAG
GAAGTGTTTA CCACCTTACT TGAAACCATC GTCTTGGTGG GTATAGTTAT TCTGCTGATG
ATGGGCTCTT TTAGAACCGC ATTAGTGCCC TTGATCACTA TCCCAATTTC AATTCTTGGC
GCCATTGCTG CCATGACCTT GATGGGCTTT TCACTCAACT TATTGACCTT ACTGGCTATC
GTGCTTTCGG TGGGTTTAGT GGTGGATGAT GCCATTGTGG TGGTCGAAAA CGTCGCTAGA
CACATGCGCA CCGGCATGAG TGGCCCAAAA GCGGCGTTAT TGAGTTCACG TCAGCTGTTC
ACGCCCATTA TCGGTATGAC CATCACCTTA GCTGCTGTGT ATGCACCCAT TGGCTTTTTA
TCTGGCTTAA CTGGGGTATT GTTCAAAGAG TTTGTGTTCA CCTTAGCCAC GGCGGTATTG
ATGTCGGGTT TAGTGGCCTT AACCTTGTCG CCCATCATGA GCGCCATGGT GTCACCTAAA
GGCGGTCAAG AAGGCAAAAT GACCTTAGGC ATTAACCATC AGTTTGCACG CCTTGAAAAA
GCTTATGCTA AGTTATTAAC GCGCGTGTTC AACAACCGTC CTCAAGTTAT CGTATTTGCG
GTGTTCGTGA CCTTGTTGAT CCCGCCCTTG TACCTGTTTT CAAAATCTGA GCTGGCGCCG
GTGGAAGATC AATCAAGCAT TCAGATGTTT GTTGAAACCC CGCCAGAATC CACCCTCGAA
TACACTAGCC TGCAGATGAA AGCCTTGGTA GAAACGGCCA TTCAGACTCC AAACAGCGTC
GGTATGTGGC ATCTAGTCTT TGGCACATCT GGGTTTGGCG GATTAAATTT TGTGCCCGTG
AGTGAGCGTG AAGAGGGCAT TCAAGCGTTA CTGGGGCAAG TCTATGGGGT ATTGAGTCAA
TTCCCAGAAG TCACCGCGTT CCCCATTTTG CCCGCGGCGC TGCCATCTTC AGGTCAGTTT
GATGTGGAAA TGGTGGTGAC TTCCTCTGTG CCTCAACCTT TAATGGCAGA TTATGCCCAG
CAGTTAGTGT ATGCCGCCTT TCAAAGTGGT CAGTTTATGT TTGCTGATAC TGACTTGAAA
GTGGACTTAC CCCAGCTAGG GTTTGAGTTT AATAAAGCCA AGATTGCCGA CTTAGGCATG
ACCATCAGTG ATGTGAATCA GCAGTTATCT TTCTTGCTCG CTGACAATTA TGTCAATCGT
TTCAACTTGG ACGGTAAGGC CTACAAGGTT ATTCCCCAGG TATCTGAAGA GTTTAGAAAG
GATCAACAGG CGATATTAGC GTTGCAACTC ACCACGGCAG ATGGGCAGTT AGTGCCATTG
TCCAGCATTG CCACAGTGGT TTCTAACGCT GCGCCGCGAA AGCTCACCAA ATTCGGTCAG
CGTAACTCCT TCCGTATTTA TGGCGGTATA TTACCTGGTA CCACCAAGGA GCAAGCCTTA
GTGACGCTAG AACAAGCGGC GGCAAACATT TTACCTGCAA GTTACAGCAT AGATTACATG
GGTGAATCAC GACAAATTCG TAAAGAAGGC AACACCTTAG TGGGCGTGTT AGGCATCGCC
TTAGTGTTCG TGTTCTTTGT GTTGGCAATT CAATTTAACA GCTTTAGGGA TCCCTTAGTG
GTGTTATTAG GCTCAGTGCC GCTGGCATTA TCCGGCGCCT TGATGTTGTC ATTCATGAAT
GTCACCACCA TTAACATTTA CTCGCAAATA GGCCTGATTA CTTTAGTGGG ACTTGTGGCT
AAAAATGGCA TCTTAATTGT AGAGTTTGCC CGTCATTTAC AACTTGAAGG CTTAGATAAA
TCTCAAGCTG TGATAGAGGC GGCCAGTGTG CGTCTGCGTC CAATTTTAAT GACCACAGCG
GCGACAGTGC TCGGCCATTT CCCCTTGGTC TTGGTCAGCG GTGCGGGCGC TGCTGCAAGA
AACAGTATCG GTATTATGTT GGTGGCCGGC ATGCTTATCG GCACCTTCTT CACCTTGTTT
GTCTTGCCTG TAATTTATTC TTACATAGCG CAAACGCATA ACAAGGTGAG TCAAGATTAA
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| Protein sequence | MSENHYPPRV TDMFVTRPIL AIILSLTLVI VGAIAAMKLP VLQYPQIESS SLVISTVYVG
ASAEEIQGFV TDPIEKAAAT ITGVDFISSE SKASSSSQVT IQLALNADST KALAELNTRL
SQIRFELPQE AQDPSITVVR ADRPYASFYL YADTQDFSRA ELSDYLERQV NPLLNSLPGV
QKVGLEGGRS PAMRIWLNPT KMSMLKVSTN DIQQALLRNN VAATIGNTEN PTQRIDLVAN
TLLTDKASFD NITIKDVDGR SIKLIDIAKV ELGAEQATAE AGYNLTNSVY VSIYTQPGAN
EIDIGDKLYE KLASLNQGLP KDLQLKMAYD ATQYMRDSIK EVFTTLLETI VLVGIVILLM
MGSFRTALVP LITIPISILG AIAAMTLMGF SLNLLTLLAI VLSVGLVVDD AIVVVENVAR
HMRTGMSGPK AALLSSRQLF TPIIGMTITL AAVYAPIGFL SGLTGVLFKE FVFTLATAVL
MSGLVALTLS PIMSAMVSPK GGQEGKMTLG INHQFARLEK AYAKLLTRVF NNRPQVIVFA
VFVTLLIPPL YLFSKSELAP VEDQSSIQMF VETPPESTLE YTSLQMKALV ETAIQTPNSV
GMWHLVFGTS GFGGLNFVPV SEREEGIQAL LGQVYGVLSQ FPEVTAFPIL PAALPSSGQF
DVEMVVTSSV PQPLMADYAQ QLVYAAFQSG QFMFADTDLK VDLPQLGFEF NKAKIADLGM
TISDVNQQLS FLLADNYVNR FNLDGKAYKV IPQVSEEFRK DQQAILALQL TTADGQLVPL
SSIATVVSNA APRKLTKFGQ RNSFRIYGGI LPGTTKEQAL VTLEQAAANI LPASYSIDYM
GESRQIRKEG NTLVGVLGIA LVFVFFVLAI QFNSFRDPLV VLLGSVPLAL SGALMLSFMN
VTTINIYSQI GLITLVGLVA KNGILIVEFA RHLQLEGLDK SQAVIEAASV RLRPILMTTA
ATVLGHFPLV LVSGAGAAAR NSIGIMLVAG MLIGTFFTLF VLPVIYSYIA QTHNKVSQD
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