| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_1585 |
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| Symbol | |
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| ID | 4018060 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 1842764 |
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| End bp | 1843483 |
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| Gene Length | 720 bp |
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| Protein Length | 239 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637955595 |
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| Product | regulatory protein, TetR |
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| Protein accession | YP_562592 |
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| Protein GI | 91792941 |
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| COG category | [K] Transcription |
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| COG ID | [COG1309] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0000139754 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTGCCCAG CAGCAAGACA CACGGCTGAA CAGCAGCTTG AAATGATTTT ATCCGCTGCG
GTTAGCGTGA TAGAAGCCTC GTCATTATTG GACTTTAAAA TGACCAGTAT TGCCAAAGAG
GCGGGCTTGT CTGTGGGCTC CTTGTATAAG CATGTGCAAA GTAAAGAAGA TTTGATCATT
TTACTGGCTT GCGAAATGAG TGAGCACATA CATGGCTTGA TGATGACCAT CTATGACACG
CCACTGAGCA TGCCGCAGAA ACTGATTTCA TTTCTGTTAT TGGATCCTAA GAAAGCGAGG
CGTTTTAGCT TTGATTTGGA TTTAGAAACC CTCTCGGGCA GTGAACCTGT GCTGCGTCGC
TGTTCTCCCA TGTGGAAGGC AAGATTTTTA GCGCTGGAAA GTAAGCTGAG CGAAATGTGC
GTGCAAAAAA ACATGGACTG CTTTGAGTCG GGTGAGTTTA TTGGCGACAA CGTTGAGGAA
GTGGAAGAAC TTAATTTCGG CAACTGGGCC ATGTCCATCG GCTTTAAACA AATTCACAGC
TATTTTGATG TACTGTCACA ACATATACCA GCCCAAGGCT GTGGCGACAA TTTTACCTTA
GGCAATAGCA GTGTGAGAGC CATGATGCGC TTCATTAATG CCTACCCCTG GAAACAACCA
TTAACCCTAG AGGGGATTGA GCTGACTAAG CAAGAATTAA TCAAACTCGG TTATCGCTAA
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| Protein sequence | MCPAARHTAE QQLEMILSAA VSVIEASSLL DFKMTSIAKE AGLSVGSLYK HVQSKEDLII
LLACEMSEHI HGLMMTIYDT PLSMPQKLIS FLLLDPKKAR RFSFDLDLET LSGSEPVLRR
CSPMWKARFL ALESKLSEMC VQKNMDCFES GEFIGDNVEE VEELNFGNWA MSIGFKQIHS
YFDVLSQHIP AQGCGDNFTL GNSSVRAMMR FINAYPWKQP LTLEGIELTK QELIKLGYR
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