| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_1552 |
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| Symbol | |
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| ID | 4018025 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 1804074 |
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| End bp | 1806659 |
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| Gene Length | 2586 bp |
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| Protein Length | 861 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637955562 |
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| Product | PII uridylyl-transferase |
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| Protein accession | YP_562560 |
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| Protein GI | 91792909 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG2844] UTP:GlnB (protein PII) uridylyltransferase |
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| TIGRFAM ID | [TIGR01693] [Protein-PII] uridylyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.350187 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATAGCG CGCTGGTCGC CAAACAACAG CTTGCGGAAT TAAACCAGCG TTTAATGGCG
CAGTTCACCG CGAACGAGTC AATTGAATTG CTCGTCAGTC AGCGCAGTCA ATTTGTGGAT
CAACTGCTCA ATTCAACTTG GCAGCGTTTA GGCCTTAACG AGTTTTCTAT TACTCTGGTT
GCCGTTGGCG GTTACGGTCG CAGTGAACTT CACCCTCACT CAGACATAGA CTTACTCATC
TTGTTGCAAA ATGATACCGT CTGCCAACAA GCTGAGATGC AACTTAGCGC TTTTATTACC
TTTTTATGGG ATGCAGGCCT TGAAGTTGGC CACAGTGTGC GTACTTTGGC ACAAACCTTA
GAACAAGGTC GCGACGATAT CACCATAGCC ACCAATCTTA TCGAAGCGCG CTATTTATGT
GGCGATGAGT ACCAGTTTGA TTTGCTCTAT GACAGCATAC GTCAACAGGA TTTTTGGCCG
TCAGAGCGAT TTTATGATGC AAAAAAAACC GAGCAGCAAA ATCGCCATAC CAAGGGCAGC
GCCTTCGATT TAGAACCCAA CCTCAAGACC TGTCCCGGTG GCCTTAGGGA CATTCAAACC
ATTGCCTGGG TCGCTATGCG TCATTTTGAT GCCGCCAAAC TCGAAGATTT GGTGGCCCAC
GAGTTTTTAA CCCCATCAGA ACTCGATGAA CTCTTGGAGT GCCAACGTTT CTTGTGGCAA
CTCAGATTTG CGCTGCACAT GATTTCCAAT CGTAATGAAA ATAGGCTTCT GTTCGATTTA
CAGCGCCAAG TTGCCAGCAT TATGGGCTAT GAAGATGCTA CCCAGCTGGC GGTGGAGCAG
TTAATGAAAA AGTACTATCG CACGGTTCGC AGTGTGATAG AGCTGAATGA AATGCTGCTG
CAATTGTTTA AACGTGCCAC CTTAGGTCAG ACTCACGCTT TAGTTATCCA GCCTATCAAT
GAATGCTATC AACGCCGTGG CCGCTTTATT GAAGTGCTCG ATGGAGGCCT ATTTAGTCGC
TGCCCAGAAG AAATTATCCG TTTGTTTCTC ATTGTGGCAA AAAACTCCAA TATCCAGGGC
ATTTATGCCC CAACACTAAG ATTACTTCGT GAGGCAAGGC AAGACTTAGC AAGCCCCTTG
CAAGAGAATT CAGCCTGTCG TAAAGCCTTT ATGGACATTT TGAAGCACCC CAGAGGCATA
GGGTCCTTGT CCTTGATGCA TAAACACGGG ATTTTATCTT CATATTTACC GGCATGGCGT
AAAATTGAAG GCCAGATGCA ATTTGATCTA TTTCATGCCT ACACTGTGGA TGAGCACACC
CACAGATTAC TGCTTAATAT TGACCGTTTT TCACAGGCCG AGCAAAAAGA TGAATTCCCA
TTAGGGGCTA TCCTGATTAA CCAATTGCCC AAAAAAGGCT TGCTCGTCCT TGGCGCTATC
TTTCATGACA TCGCCAAAGG TCGCGGCGGC GATCACAGCA AACTGGGGGC TAAGGATGCC
TTGGATTTTT GCAAACTGCA CGGTCTTAAC GATCATGATG GCCGCATGGT CGCTTGGTTG
GTTGAGCATC ATCTGGTGAT GTCCATCACA GCCCAGAGGC GGGATATCTC AGATCCCGAA
GTAGTGGCTG AATTTGCCCA TAAAGTCCGT GATGCCGTGC ATTTAAGCTA TCTGTATTGT
TTAACCGTTG CCGATATTTG TGCCACCAAT GAAAAAACCT GGAACAGCTG GAAAGGCTCC
TTACTGCGAG ACTTGTACTT CTCCACCCAA AGGGTATTGG CAACTGGCAA GGAAAAGCCC
ATAGACATGC GCGCTAGGGT GCGAGAAATA CAGGCCAAGG CCAAGAAAGA GCTATTGAGA
CGTGGGATTA AAGAAAAGGA GATGGAGGCC CTTTGGAGCC GCTTCAAAAC TGATTATTTT
CTGCGTCACC AAGCAAGCCA AGTGGCTTGG CATACTGAAG CCATCATCAA GCAAAGCCAT
CAAGATGAGC CCTTGATTTT ATTATCCAAA CAGGCGACCC GTGGCGGCAC TGAATTATTT
ATCTACAGCA AAGATAAACC CAAATTATTT GCCACTGTGA TGACAGTGCT GGATAATAAA
AATATCAATG TTCATGATGC TAACATCATG ACATCAAAAG ATAATTATGC GTTAGATACC
TTCGTCATTC TAGAACAAGA CGGTGAAACT ATTAGCCAGT TATCACGTAT ACAGAGCATA
CGAAAGGCAC TGGAAAAAGC CCTCGCCAGC GACAACCCTA AGTTACCAAA ATTTAGGAAA
ATGGCGCGAA TAATGCGCCC CTTTAACGTC CCGACTCAGG TAAGTTTCTT GCCTAGCGCC
CGTCAAGGCA CCAGCATGAT GGAGCTCATC GCCTTAGACA GCCCGGGATT ATTGGCAAAA
GTGGGCGATA TTTTTTACCG CTGCCAGGTG ACGTTAATTG CTGCGAAGAT CACCACTATT
GGCGAGCGAG CTGAAGATTT CTTTATTTTA CAAACTCATG AAGGTAAAGC CTTGGATGAA
GCTTCGCAGC AAAAATTAGC TCAGAGTCTT AGTTTAGCTT TATCATCCCA TGCACCGAGC
ATGTAA
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| Protein sequence | MNSALVAKQQ LAELNQRLMA QFTANESIEL LVSQRSQFVD QLLNSTWQRL GLNEFSITLV
AVGGYGRSEL HPHSDIDLLI LLQNDTVCQQ AEMQLSAFIT FLWDAGLEVG HSVRTLAQTL
EQGRDDITIA TNLIEARYLC GDEYQFDLLY DSIRQQDFWP SERFYDAKKT EQQNRHTKGS
AFDLEPNLKT CPGGLRDIQT IAWVAMRHFD AAKLEDLVAH EFLTPSELDE LLECQRFLWQ
LRFALHMISN RNENRLLFDL QRQVASIMGY EDATQLAVEQ LMKKYYRTVR SVIELNEMLL
QLFKRATLGQ THALVIQPIN ECYQRRGRFI EVLDGGLFSR CPEEIIRLFL IVAKNSNIQG
IYAPTLRLLR EARQDLASPL QENSACRKAF MDILKHPRGI GSLSLMHKHG ILSSYLPAWR
KIEGQMQFDL FHAYTVDEHT HRLLLNIDRF SQAEQKDEFP LGAILINQLP KKGLLVLGAI
FHDIAKGRGG DHSKLGAKDA LDFCKLHGLN DHDGRMVAWL VEHHLVMSIT AQRRDISDPE
VVAEFAHKVR DAVHLSYLYC LTVADICATN EKTWNSWKGS LLRDLYFSTQ RVLATGKEKP
IDMRARVREI QAKAKKELLR RGIKEKEMEA LWSRFKTDYF LRHQASQVAW HTEAIIKQSH
QDEPLILLSK QATRGGTELF IYSKDKPKLF ATVMTVLDNK NINVHDANIM TSKDNYALDT
FVILEQDGET ISQLSRIQSI RKALEKALAS DNPKLPKFRK MARIMRPFNV PTQVSFLPSA
RQGTSMMELI ALDSPGLLAK VGDIFYRCQV TLIAAKITTI GERAEDFFIL QTHEGKALDE
ASQQKLAQSL SLALSSHAPS M
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