| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_1520 |
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| Symbol | |
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| ID | 4017399 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 1765264 |
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| End bp | 1766715 |
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| Gene Length | 1452 bp |
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| Protein Length | 483 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637955530 |
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| Product | Sodium/proline symporter |
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| Protein accession | YP_562528 |
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| Protein GI | 91792877 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0591] Na+/proline symporter |
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| TIGRFAM ID | [TIGR00813] transporter, SSS family
[TIGR02121] sodium/proline symporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACGATTG AAACGCCTAT TTTTATTACC TTTTTTGGTT ACCTCGCCCT GATGATGGCC
ATTGGTTTCT GGGCCTTTAA AAAAACTGAC ACTGTGGGAG ATTATATTCT CGGTGGCCGT
AAAATGGGAC CGGCTGTGAC TGCGCTTTCT GTGGGCGCAT CTGACATGTC GGGTTGGCTG
TTACTTGGTC TGCCTGGCGC CGTCTACCTT GGCGGACTTG GAGAGTCTTG GATAGGATTT
GGACTTATAT TTGGCGCTTG GCTCAATTGG CTGTTTGTGG CAAAACGCCT GCGGGTTTAC
ACAGAACTTG CTGATAACGC ACTGACGTTA CCCGATTTTT TTGAAAATCG CTTCAATGAT
CCTAAGGGCG TGATCAGGTT ATTATCCGCC ATTACCATCT TGGTTTTTTT CACTTTTTAC
GCTTCCTCTG GCATGGTGGG CGGCGCCATC TTGTTTGAAA AAGTCTTTGG ACTCGATTAC
ACCACGGCCC TGCTCATTGG CTCTTTCATC ATAGTGTCAT ACACCTTTGT GGGTGGTTTT
TTTGCCGTAA GTTGGACCGA CTTTTTCCAA GGCTGTTTAA TGCTTATCGC CTTAGTGTTT
GTGCCCGTGG TCATTTTTAG TGAACCTGAA ATCCAGCACA ATTTAAGCGT TATCGATCCT
GCCATGCTCA ATTTTATCAG CGATGAAACC AGCCTCATTG GCTTGATTTC CTTACTCGCT
TGGGGGCTTG GCTATTTTGG TCAGCCACAT ATTTTGTCGC GGTTTATGGC CATAGGTCAG
GTTTCCGACT TACCTTTATC TCGCCGTATC GCCATGGGTT GGATGGCCTT AGCCCTGATA
GGCTCCCTAG CGACGGGTAT TGCCGGCAGT CTGTATTTTG CCAATAGCCC CATCGAAAAT
GCCGAGACTG TGTTTATTCA GTTAACGCAT GCTGTGTTTA ATCCATGGAT TGGTGGTCTA
CTTATCGCCG CTATTTTGTC AGCCATTATG AGTACCATAG ATTCACAGCT GTTGGTTTGC
TCCAGCGTAG TCACCGAAGA TTTTTACTTA AAATGGCTTC GCCCGCAGGC AAGTGATAAA
GAACTCATAC TCGTGGGCCG CTTTGGCGTC ATAGCCATCG CATTAGTTGC AGGGGTTGTG
GCACTGGATC CACAAAGTAG TGTATTAGGC TTAGTGAGTT ATGCGTGGGC CGGCTTTGGT
GCCGCATTTG GACCTGTAGT ACTCTTATCC CTGTTTTGGC AAGGTTACAG CCGTAATGGC
GCCATCGCCA GCATACTCGC AGGCGCGATT ACCGTAGTGG TATGGAAGCA GCTTTCAGGC
GGAATATTTG AACTTTACGA AATTTTACCC GGTTTTGCCC TCGCCTTAAT TTTCGGCGTG
GTAGTCAGTA AAATCTCGCC ACCAGCACCA GCGACAACGG AAGGGTTTAA AGCATTTAAT
GCATCACTTT AA
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| Protein sequence | MTIETPIFIT FFGYLALMMA IGFWAFKKTD TVGDYILGGR KMGPAVTALS VGASDMSGWL
LLGLPGAVYL GGLGESWIGF GLIFGAWLNW LFVAKRLRVY TELADNALTL PDFFENRFND
PKGVIRLLSA ITILVFFTFY ASSGMVGGAI LFEKVFGLDY TTALLIGSFI IVSYTFVGGF
FAVSWTDFFQ GCLMLIALVF VPVVIFSEPE IQHNLSVIDP AMLNFISDET SLIGLISLLA
WGLGYFGQPH ILSRFMAIGQ VSDLPLSRRI AMGWMALALI GSLATGIAGS LYFANSPIEN
AETVFIQLTH AVFNPWIGGL LIAAILSAIM STIDSQLLVC SSVVTEDFYL KWLRPQASDK
ELILVGRFGV IAIALVAGVV ALDPQSSVLG LVSYAWAGFG AAFGPVVLLS LFWQGYSRNG
AIASILAGAI TVVVWKQLSG GIFELYEILP GFALALIFGV VVSKISPPAP ATTEGFKAFN
ASL
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