| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_1510 |
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| Symbol | |
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| ID | 4017389 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 1756853 |
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| End bp | 1757926 |
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| Gene Length | 1074 bp |
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| Protein Length | 357 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637955520 |
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| Product | secretion protein HlyD |
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| Protein accession | YP_562518 |
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| Protein GI | 91792867 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCATCGA TTACCAAACG CCTCATAAGC CTATTGCTGC CATGTGCCTT GCTTATCGCC
TGTAGCCCAG AGCCACAAGT CAGCACTAAA CCAGTACTGA CGGTCACTCA CCAAGTATTA
GCGGCTCCCG TTACCGCTCA ATATCGTGAT TTTATCGGTC AAGTTGTCCC CGCCGAATTG
ACTCCGCTGT CGTTTAGAAT TGCCGGCGAA ATCAGCCAAG TATTAATAAA GCCTGGTGAA
CCTGTCACTA AAGGCCAAGT ACTGATTAAA CTTGATTCCA GAAAAGCTGA GCAGAAACAA
GCCGATACTC AAGCAAAAAT GGTTCTCGCC CAAAAGCAAT TAAGTCGCGC TAGGAGCCTA
GTCAGTCAGC AGCTGATTTC TCAGGCCGAG CTCGATGAAC TTATCGCCAA CGTAAAACTC
GCTGAAATCA ACCAAAAGCT GGCTGAAGCT CAAGTCAAAT ACAGCGTGAT CCGTGCCCCT
TTCTCTGGGC TAGTGTCTGA AGTCAACAAA GAGAATTATG AAACCGTCGC CCCCAGTGAA
CCTGTGGTTA AGCTGTATCA AAGCGATAAG ATTTACGTAA AAATTCAATT GCCTGACGTT
ATTCTGGCTA GATTTAACCC TGAGAAAAAA GAAACTAATT ACAAACCCAC CCTGCAATTT
GCTAATGGTG GCACTGAGCA TCAAGTGTCA TTGCTGGAAT ACACTATGCA GCTCACTGCG
CAAACACAGG CCTATGAAGC TTGGTTTGTC ATGCCGCAAA CGACGCCCGT CACCCTGCCG
GGTACCACAG CCACAGTGCA CATAGATTTA ATCAAGGCAG GCATTAGTGG CGAGCTGGGT
TATCAAGTGC CTGTGAATGC ACTGGATCCT GGCATGCAAG CTAATCAATT TTATGTTTGG
AAACTACTCG ATGGCAAAAT TAGTAAGCAA GCCGTCGATG TTGTACAGAT GTCTAGCTTA
GGCGCCTTAG TGATTAATGG CTTAAATGAA GGCGATCGCA TCGTGACCTC ACACTTAAAT
CAATTGCGTG AAGGCATGCA AGTTAATTCA ACCACACAGG AGCAAGCACT GTGA
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| Protein sequence | MPSITKRLIS LLLPCALLIA CSPEPQVSTK PVLTVTHQVL AAPVTAQYRD FIGQVVPAEL
TPLSFRIAGE ISQVLIKPGE PVTKGQVLIK LDSRKAEQKQ ADTQAKMVLA QKQLSRARSL
VSQQLISQAE LDELIANVKL AEINQKLAEA QVKYSVIRAP FSGLVSEVNK ENYETVAPSE
PVVKLYQSDK IYVKIQLPDV ILARFNPEKK ETNYKPTLQF ANGGTEHQVS LLEYTMQLTA
QTQAYEAWFV MPQTTPVTLP GTTATVHIDL IKAGISGELG YQVPVNALDP GMQANQFYVW
KLLDGKISKQ AVDVVQMSSL GALVINGLNE GDRIVTSHLN QLREGMQVNS TTQEQAL
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