Gene Sden_1489 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_1489 
Symbol 
ID4017258 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand
Start bp1726843 
End bp1727343 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content43% 
IMG OID637955499 
Productcolicin V production protein 
Protein accessionYP_562497 
Protein GI91792846 
COG category[R] General function prediction only 
COG ID[COG1286] Uncharacterized membrane protein, required for colicin V production 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000231949 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTATGGA TTGATTACGC AATTATCATC CTGATCGGCC TATCAACCCT GATAAGCCTT 
ATACGTGGAT TTGCCAAAGA GGCCATGTCT CTTGTTGTTT GGTTTGCAGC CTTCTTTATT
GCCAGCCAGT TTTATCTCGA TCTTGCGGTG CACCTGACTC AGATGTCAGA TGAATTGTTC
CGTAACGGCG TTGCTATCGC TATTTTATTT ATCACCACCC TAATTCTAGG CGCATTAATT
AATTACCTCT TAGGTCAACT GGTGGCCAAA ACGGGCCTTT CCGGTACTGA CAGGGTATTA
GGTGTGTGTT TCGGCGCCAT TCGCGGCGCG CTTATCGTGA GTGCGTTACT GTTTTTTATG
GATGCTTTTA CCGCTTTCCC CAATTCAAAT TGGTGGAAGC AATCTGTGTT AGTGCCTGAA
TTTGGTGTGG TTATTCAATG GTTTTTTACC TATTTGGAAA ACACCTCCAG CTTTGTACCC
CAAAATATAA TGATAAAATA G
 
Protein sequence
MVWIDYAIII LIGLSTLISL IRGFAKEAMS LVVWFAAFFI ASQFYLDLAV HLTQMSDELF 
RNGVAIAILF ITTLILGALI NYLLGQLVAK TGLSGTDRVL GVCFGAIRGA LIVSALLFFM
DAFTAFPNSN WWKQSVLVPE FGVVIQWFFT YLENTSSFVP QNIMIK