Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_1432 |
Symbol | nadE |
ID | 4017421 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | + |
Start bp | 1668470 |
End bp | 1669297 |
Gene Length | 828 bp |
Protein Length | 275 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637955440 |
Product | NAD synthetase |
Protein accession | YP_562441 |
Protein GI | 91792790 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0171] NAD synthase |
TIGRFAM ID | [TIGR00552] NAD+ synthetase |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.0922379 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAAAGGGC AAATTTTACG AGAAATGAAA GTACTTAAGG CCATAGAGCC TGAGTTTGAG ATAGCGCGCA GAGTCGCGTT TATTAAAGCC AAATTGATAG AAGCTCACAG CAAGACGTTA GTATTGGGTA TTAGTGGCGG GGTGGACTCC TCTTTAGCTG GGCGTTTATG CCAGCTGGCA GTGAACAGCC TTAATCAAGA AAAGAGCACC GACAGCTACC AGTTTATCGC GGTGCGCCTG CCTTACCATG TGCAAAAAGA TGAGCATGAA GCTCAGCTTG CCTGTCAATT TATTCAGCCC AGCAAATTGG TGACAGTCAA TATTCATGAT GGTGTCGTAG GGGTACACAA TGCCACCCTT GCAGGCCTAG ACGCGGCAGG CTTGACGCAC GATAGCACTA AGGCGGATTT CATTAAGGGC AATGTCAAAG CTAGGATGCG CATGATAGCT CAATATGATA TCGCGGGTCT GGTGGGCGGA CTTGTGGTGG GCACAGATCA CAGCGCCGAA AACATCACTG GCTTTTATAC TAAATGGGGT GATGGTGCTT GTGATTTAGC GCCGTTATTT GGCCTTAATA AGCGTCAAGT ACGCCAGCTG GCGGCTTTCT TGGGCGCACC ACAAGTGTTA GTGGTTAAAG CACCGACGGC GGATCTGGAA GAAAATAAGC CTCAGCTTGA AGATGAAGTC GCCTTAGGAC TGAGTTACGA TGCAATCGAT GACTTTTTAG AAGGCAAACC TGTGAGCCAA GCCGTAGAAG ACAAATTAGT GGCGATTTAT CTTCGCACCC AACATAAGCG CCAGCCTATT GCGACGATTT ATGACTAA
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Protein sequence | MKGQILREMK VLKAIEPEFE IARRVAFIKA KLIEAHSKTL VLGISGGVDS SLAGRLCQLA VNSLNQEKST DSYQFIAVRL PYHVQKDEHE AQLACQFIQP SKLVTVNIHD GVVGVHNATL AGLDAAGLTH DSTKADFIKG NVKARMRMIA QYDIAGLVGG LVVGTDHSAE NITGFYTKWG DGACDLAPLF GLNKRQVRQL AAFLGAPQVL VVKAPTADLE ENKPQLEDEV ALGLSYDAID DFLEGKPVSQ AVEDKLVAIY LRTQHKRQPI ATIYD
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