| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_1391 |
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| Symbol | |
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| ID | 4017354 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 1622555 |
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| End bp | 1623244 |
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| Gene Length | 690 bp |
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| Protein Length | 229 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637955393 |
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| Product | MotA/TolQ/ExbB proton channel |
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| Protein accession | YP_562400 |
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| Protein GI | 91792749 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0811] Biopolymer transport proteins |
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| TIGRFAM ID | [TIGR02796] TolQ protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0000787618 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCACGCTG AAATATCCTT TATAGGTCTG TTTTTAGAGG CGAGTCTGTT GGTGAAGCTA
GTGATGCTCA CCTTATTAGG TCTCTCTATT ATGTCTTGGG CTGTGATCAT TCAGCGCCGA
AAGTTATTGA ATACTGCCAA GGCTAAGTCT GCACGTTTTG AAGACACCTT CTGGTCTGGT
GTTGATTTGA ACCGACTCTA CAAGGAGCTG GTGGCTCGTG GTGATTCAAT TGCCGGCTTA
GAGTGTTTGT TTGTCGCAGG TTTCAAAGAG TATTCTCGAT TAAGTAAATC CAGTGGCAAG
CAACCTGATG CGGTCATGGA CGGAACGTCT CGTGCCATGC GGGTGAGTTT ATCCAGAGAA
ATCGAAAAAC TTGAAAATAA CTTGCCACTG CTTGCCACAA TTGGTTCTAC TAGTCCTTAT
ATCGGTCTAT TTGGTACTGT TTGGGGGATC ATGAACTCAT TTATCGCCAT AGGTACAGTG
CAAAACGCCA CATTAGCTAT GGTGGCCCCT GGTATTGCTG AAGCCTTGAT CGCGACAGCC
ATGGGTTTAT TTGCAGCCAT TCCAGCCGTG ATTGGTTACA ACAGATTTAC CACTCAAGTG
GATAAGCTAG AAACGGCCTA TGTGAACTTT ATGGAAGAGT TTTCCAACAT ATTACATCGC
CAAGCGTATA GCGAGAAGGA AGCGGTTTAA
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| Protein sequence | MHAEISFIGL FLEASLLVKL VMLTLLGLSI MSWAVIIQRR KLLNTAKAKS ARFEDTFWSG
VDLNRLYKEL VARGDSIAGL ECLFVAGFKE YSRLSKSSGK QPDAVMDGTS RAMRVSLSRE
IEKLENNLPL LATIGSTSPY IGLFGTVWGI MNSFIAIGTV QNATLAMVAP GIAEALIATA
MGLFAAIPAV IGYNRFTTQV DKLETAYVNF MEEFSNILHR QAYSEKEAV
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