Gene Sden_1221 details

Gene Information

• Locus tag: Sden_1221
• ID: 4017487
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella denitrificans OS217
• Kingdom: Bacteria
• Replicon accession: NC_007954
• Strand: +
• Start bp: 1425110
• End bp: 1425796
• Gene Length: 687 bp
• Protein Length: 228 aa
• Translation table: 11
• GC content: 46%
• IMG OID: 637955217
• Product: hypothetical protein
• Protein accession: YP_562230
• Protein GI: 91792579
• COG category: [S] Function unknown
• COG ID: [COG4764] Uncharacterized protein conserved in bacteria

Plasmid Coverage information

• Num covering plasmid clones: 32
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGATTTTA TCCTCCCCCA ATATCAGGCT CGCCTTGCGA TACTCCTTCG TTTATTGATT 
AACGGATTAG CTGCTCATTA TCGTTCGTTA CTCGCCCTAG TGCTCAGTTT ATGCTTGTCT 
GCTTGCGCGA CTTCTCCGCC AAAACAGCCC GATAATATCT GCGCCATTTT TAAAGAACAC 
AGAAGCTGGT ACAAGGCCGC CATTAACACC CAAGAAAAGT GGGGGGTTCC TGTGCATGTG 
CCCTTTGCGA TGATGTATCA GGAAAGCTCG TTTAAACATA ATGCCGCGCC GCCAATGGAA 
TACTTTTTAG GTTTTATCCC CACGGGGCGG GCCAGCGATG CCTACGGTTA TGCTCAGGCA 
AAAACCATGA CCTGGGATGA TTACGTGCGC GAGACGGGCA ACTCTTGGTC TAGTCGCAGT 
GATTTTGATG ATGCCATGGA TTTTATGGGT TGGTTTATTT ATAAAACCCA TAAAATTAAT 
GGGGTGTCAA AGTGGGATGC CAACAAGCAA TACCTTAACT ATCATGAAGG TTGGGGCGGC 
TATAAGCGTA GAAGTTACCA TGCTAAGCCT TGGCTCATTA AGGTGGCAAA GAAGGTTGGC 
AATCGTTCAT ACCGTTATGC TAAGCAGTAT AAACAGTGCA AAGAGGAGTT GGATGCTTCT 
TGGTTTTGGC GAACATTTAT AAATTAG 

 

Protein sequence

MDFILPQYQA RLAILLRLLI NGLAAHYRSL LALVLSLCLS ACATSPPKQP DNICAIFKEH 
RSWYKAAINT QEKWGVPVHV PFAMMYQESS FKHNAAPPME YFLGFIPTGR ASDAYGYAQA 
KTMTWDDYVR ETGNSWSSRS DFDDAMDFMG WFIYKTHKIN GVSKWDANKQ YLNYHEGWGG 
YKRRSYHAKP WLIKVAKKVG NRSYRYAKQY KQCKEELDAS WFWRTFIN