| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_1209 |
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| Symbol | |
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| ID | 4017732 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 1407714 |
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| End bp | 1408436 |
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| Gene Length | 723 bp |
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| Protein Length | 240 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637955199 |
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| Product | LytTr DNA-binding region |
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| Protein accession | YP_562218 |
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| Protein GI | 91792567 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3279] Response regulator of the LytR/AlgR family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 42 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGAATCG CCATCATAGA AGATGAACCC TTGGCAGCAG AAAAGCTCGC AGGCTACATA
CAAAGGCAGT GGCCAGAGGC TAAAATTATT GCCACCTTAA GCAGTGTCGA TGCCGTGATT
GAGTTTTTCA ATCAACCGCA GAACTTAGAT TTACTTTTTA GCGATATAGA GCTCAGTGAT
GGCCAAGTCT TTAGCGCCCT AGAGCAAATT GATGTGCCCT GCCCAGTCAT TTTTACCACC
TCCTATAACG ACTACTGGAT GAATGCGTTT CAAAACCAGG GCATTGAATA TTTGCTCAAG
CCTTTCTCTT TTAAGCGTTT TAGCCAAGCG GTCGCCAACT ATCAAGCATT GTTTGAGCAG
CGCTCAAAAA TTGAGACCAC CTCGTTTAAA CAACGATTTA TTATCAAGCA ACAAGGCGCC
AGCGAGATGC TTAATGTCGC AGAGATCCAT TGTTTTCGAG CCGCCAACGG CACTATTTTG
GCCGGTGATA AGCAAGGCCA ATACCATATC CTTTCTGACA ATAACCTCAG CCAATTAGAA
GCTCAGCTCG ATCCTAAGGT CTTCTTTCGG ATTAACCGCG CCGACATCAT TAATATCAAT
AGCTTAATTA AATTTGAAAC CTACACCAAA GAAACACTCG CCCTGTATAT CAAAGGCTAC
AGTGAAGCCT TAGTGACCAG CAAAACCCGC ACCGCAAATT TTAGAAAATG GCTAGAAGCC
TAA
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| Protein sequence | MRIAIIEDEP LAAEKLAGYI QRQWPEAKII ATLSSVDAVI EFFNQPQNLD LLFSDIELSD
GQVFSALEQI DVPCPVIFTT SYNDYWMNAF QNQGIEYLLK PFSFKRFSQA VANYQALFEQ
RSKIETTSFK QRFIIKQQGA SEMLNVAEIH CFRAANGTIL AGDKQGQYHI LSDNNLSQLE
AQLDPKVFFR INRADIININ SLIKFETYTK ETLALYIKGY SEALVTSKTR TANFRKWLEA
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