| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_1184 |
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| Symbol | |
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| ID | 4017669 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 1374329 |
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| End bp | 1375726 |
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| Gene Length | 1398 bp |
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| Protein Length | 465 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637955174 |
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| Product | DEAD/DEAH box helicase-like protein |
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| Protein accession | YP_562193 |
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| Protein GI | 91792542 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.000204696 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTCGTG AAAACAGCTC GCCATCTGAA CCTACCTCGT CTTCGTTAAA CCATCTGCCC
CCGCAACAGG CTAAGCTTGC TCAATCTGTA TCTTTTAGCC AGCTTGGGCT CACTAAGGCG
TTAGTCACTG CTTTACCTAA GGCACTTGTC AGTGCCACAG ACATTCAGCG ACTTGCCATT
CCAGCGGGGC TTAAGGGTAA GGATGTGTTG GCATTAGCCC AGACGGGTAG CGGTAAAACC
TTAGCCTTTG GCTTGGTAAT ATTAGAAAAG CTGTTGTTGC AGGCAAAAGA GAAAAGCGTG
GCGCAAGATA AGCCCAGTGC CTTAGTCATA GTGCCCACCA GAGAACTAGC TCAGCAAGTT
CATCATGAGC TGAATACCGT GGCGATGAAG CTAAACCTGA CTAGCGCCAT AGTGTGCGGC
GGCGCTGACC TAGATAAGCA AATTGATGCC TTAGCGCAGG GGCCACAGCT GTTGATAGCG
ACCCCTGGTC GGCTGCTGGC ATTAGTGCAA GAGAAAGCCG TGAGCTTAAG TGACATCAAA
CACTTAGTGC TCGATGAAGC TGACCGTTTA TTGGAAATGG GCTTTTGGCC TGACATTCAA
AAAATTATCG CCTTCATACC CGCTAATTGC CAAAAGTTGC TGTTTTCGGC GACCTTGCCA
GTACCCTTGA GAGAACTTGC CGACAGTTTG CTGTACAAAC CCCAGCGGAT TGAAGCCAAG
GCTGCCAGTA CCCAAGTGGC AGAAATCGAA GAGCGGGCCT ATTTAGTCAA TAAAGGCAGC
AAGGCTCAGG CGCTGATCGC TCTGCTAAAA GATGCCCCGC TGAAACAAGC AGGCAATAAA
CAAACAGGCA TTAAACAGCC ATCGCTGCAG ACCTTAGTCT TTATTAATGG TAAGGATGAT
GCCGACAGCC TAGCCAAAAA GCTCAACAAG GCAGGGCTGA ATGCCAAAGC CCTCCATGGT
GATAAAGAGC AAAACATCCG TGAGCAAACA CTGGCAGAAT TTAAGCAAGG CACAGTCACA
GTGCTAGTGG CCACAGATTT ACTGGCAAGA GGGATACATT TGTCAGAGTT GCCCCAAGTG
ATTAACTTTG CCTTGCCAGA GTCTGGGGCC ACCTACGTGC ACCGTATTGG CCGCACCGGC
CGTGCAGGGG CTAAAGGCTT AGCGATTTCG CTGGTGTGCC ATGGGGAGTC TCAATACCTT
GAGGCAATAG AAGCCTTTAC TCAAAGACCG CTAAGGCTCG ATGCTTTAGC AGGGTTTCCT
GTCACAGATA AACCTGCCCC AGAAACGGCG GCTAATGCTC GTCATACCGA CAAACCTAAG
CGTGCCCCAA GGGATAAACA GGCTAATCGA CGCAGCATGA ACAAGAAGAG CATTAAAGAC
TTTCAAAGCA AAAAGTAA
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| Protein sequence | MPRENSSPSE PTSSSLNHLP PQQAKLAQSV SFSQLGLTKA LVTALPKALV SATDIQRLAI
PAGLKGKDVL ALAQTGSGKT LAFGLVILEK LLLQAKEKSV AQDKPSALVI VPTRELAQQV
HHELNTVAMK LNLTSAIVCG GADLDKQIDA LAQGPQLLIA TPGRLLALVQ EKAVSLSDIK
HLVLDEADRL LEMGFWPDIQ KIIAFIPANC QKLLFSATLP VPLRELADSL LYKPQRIEAK
AASTQVAEIE ERAYLVNKGS KAQALIALLK DAPLKQAGNK QTGIKQPSLQ TLVFINGKDD
ADSLAKKLNK AGLNAKALHG DKEQNIREQT LAEFKQGTVT VLVATDLLAR GIHLSELPQV
INFALPESGA TYVHRIGRTG RAGAKGLAIS LVCHGESQYL EAIEAFTQRP LRLDALAGFP
VTDKPAPETA ANARHTDKPK RAPRDKQANR RSMNKKSIKD FQSKK
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