| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_1063 |
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| Symbol | |
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| ID | 4016779 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 1215110 |
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| End bp | 1215850 |
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| Gene Length | 741 bp |
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| Protein Length | 246 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637955055 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_562074 |
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| Protein GI | 91792423 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 42 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAATA AAGTCGTTGC GATTACCGGC GGTAACTCAG GGATAGGCTT AGCCATGTCG
ACACTCTTTT TAGAAAACGG CTATAAGGTT GCCATTTTTG CCCGCGATAG GGATAGCATG
AAGCATTTTC AAGAGAAATC ACCTAATGAT GTATTGGTGT TCAAAGGTGA TGTCAGTGTG
AATAAAGACT TAGAAGATTT TTTCAACACC TGTTATGAAT TGTGGGGCGG CATTGATACC
TTGATAGCCA ATGCAGGAAT TGCCCAACCA GAAAACATTG CCGATGTCAC AGAAGCAAGT
TTCGATAAAT GCATGAATAT CAATGTTAAA GGGGTATTTT TTACCGTGCA AAAATCCTTA
GGCTACTTAA ATAAAGCCGC CTCAATTATC ATACTCTCCT CTATTCAAGC ACAGCGTGGT
GCAGGTATTT GGTCAGTATA TGGGGCAACC AAGGCCGCGG TGCGCTCCTT GACCCGCTCA
TTTGCCCAAG CTCTTGGCCC AGAAGGCATT AGAGTCAACA CCTTATCTCC AGGAGTCACA
GACACGCCGA TATTAACAAA GTTTGGTTTT GCTGAAGATC AATTAGCAGA CATCTTAGCC
CAAGTGTCGG CGAACACTCC ACTGGGTCGT ATTGCAAGCC CTGCAGAAAT CGCTAAATCG
GCCTTGTTTT TAGCCTCTGA TAACGCCTCA TTTATCACAG GTGCTGATTT ACAAGTAGAT
GGCGGTTTAG CGCAAATCTA A
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| Protein sequence | MKNKVVAITG GNSGIGLAMS TLFLENGYKV AIFARDRDSM KHFQEKSPND VLVFKGDVSV
NKDLEDFFNT CYELWGGIDT LIANAGIAQP ENIADVTEAS FDKCMNINVK GVFFTVQKSL
GYLNKAASII ILSSIQAQRG AGIWSVYGAT KAAVRSLTRS FAQALGPEGI RVNTLSPGVT
DTPILTKFGF AEDQLADILA QVSANTPLGR IASPAEIAKS ALFLASDNAS FITGADLQVD
GGLAQI
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