Gene Sden_1055 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_1055 
Symbol 
ID4017562 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand
Start bp1206363 
End bp1207406 
Gene Length1044 bp 
Protein Length347 aa 
Translation table11 
GC content46% 
IMG OID637955047 
Productarginine N-succinyltransferase 
Protein accessionYP_562066 
Protein GI91792415 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3138] Arginine/ornithine N-succinyltransferase beta subunit 
TIGRFAM ID[TIGR03243] arginine and ornithine succinyltransferase subunits
[TIGR03244] arginine N-succinyltransferase 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTACTTA TTCGCCCAAT TAAGGCCGCC GACTATTCGG CGCTATTACA AATTGCCACT 
GAATCTGGTG CAGGTTTTAC CTCGCTGCCT ATGGATGAGC AAAAGCTTAG CCATAAGATT
GCCCATTCCG AGCAAAGCTT TGCTGCCGAT ATAAAGTCTC CGGGTGAGCA AGGCTACTTG
TTTGTAATGG AAGACACCCA AACCGGTGAG ATTTTGGGCA CCACAGGCAT AGAAGCCGCA
GTGGGACTCA ATAACCCTTT CTATCATTTT CACAAAAGTA CAGTGGTGCA TCATAGCGCA
GAGCTTAAGG CCGTCAACCC GGTTGAAGTC TTGACCCTAT GCAATGATTA CACTGGCAGC
ACGGAAGTGT GCAGTCTGTT TTTACGGGAA CCCTTTCGGG TTGGCTTAAA TGGCCGTTTC
TTATCCAAAG TGCGCTTTAT GTTTATGGCC GAGCAGCCAC AGCGCTTTGC AAAGCTTGTG
ATTGCCGAGA TGCGCGGCGA AGCCGATGAA AATGGCATCC CGCCTTTTTG GCACTGGTTG
CAGAACAACT TCTTTAATAT GGAGTTTTCT AAGGCCGATT ATTTGATTGG TGTGGGTAAA
AAAGGCTTTA TTGCCGATTT AATGCCGCGC TACCCCATTT ATGTGGGATT ATTGCCGGTT
GAAGCGCAGC AAGTGATAGG TAAAGTGCAC CATAACACTA TGCCTGCGCT TAAACTGCTT
GAAAAAGAAG GCTTTACTCA CAGAGGCTAT GTGGATTTAT TCGATGCAGG CCCGACCGTC
GAAGCCCAGC TTAAGCAGAT AAAATCTGTG CGTCTAAGCC ATAAAATTAA AGTGCAAATA
TCCACTGATG AACAGTTAAC AGGGCCGAGC CAGTTAGGCA TATGCAACTG TGAGACCGAG
CAATTTAGAG CCACCTTCAG TGATAACTGT TACTTAGATA AAGCCTCCCA TACTCTGGTT
GTCACCAGTG CGATTGCAGA TGCGCTAAAT GTGCAAAATG GCGACAACGT ACGCTACCTA
AATCTTGATA AAGGTGCCAA ATGA
 
Protein sequence
MLLIRPIKAA DYSALLQIAT ESGAGFTSLP MDEQKLSHKI AHSEQSFAAD IKSPGEQGYL 
FVMEDTQTGE ILGTTGIEAA VGLNNPFYHF HKSTVVHHSA ELKAVNPVEV LTLCNDYTGS
TEVCSLFLRE PFRVGLNGRF LSKVRFMFMA EQPQRFAKLV IAEMRGEADE NGIPPFWHWL
QNNFFNMEFS KADYLIGVGK KGFIADLMPR YPIYVGLLPV EAQQVIGKVH HNTMPALKLL
EKEGFTHRGY VDLFDAGPTV EAQLKQIKSV RLSHKIKVQI STDEQLTGPS QLGICNCETE
QFRATFSDNC YLDKASHTLV VTSAIADALN VQNGDNVRYL NLDKGAK