| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_1034 |
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| Symbol | |
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| ID | 4017079 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 1183696 |
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| End bp | 1186086 |
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| Gene Length | 2391 bp |
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| Protein Length | 796 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637955026 |
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| Product | type IV pilus assembly PilZ |
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| Protein accession | YP_562045 |
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| Protein GI | 91792394 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTTTAG ACAACCACAA TGCTCTAATT GAGCAACTCA AGCCGCTGTT AATGGAACCT
GATTTCCAGG AGATTTTTAC CCAATTAACC GCCGATGAGT CCAATTCCAC CCGCTTTCTG
ATTAAGATGG AGCTCAATCG GCTGGCAGGA ATTTGCACGC GAATCATCGA CATGCGTGGT
AAGTCAGAAC TCGAATGCCA AGAAATCTCC CTTGGTGGCG TGACTCACTT TCTCGATGAA
CCCGCTCAAA ATGCTCTACT GCAAGCTTTG CCACTGTACC GCAACAAGTA CACCTTAGGT
GTGTATGAAC ATGTCATAAA AGCCCACAAA AAGTATTTGT ATAAGCAGCA ATTTTTGCAG
TCAAAGGCAC AGTCAGGCAC GCAGGATGTG AATGAGTTTG TGGTACCCGC TGTGGTGCTT
GGCAATTATT TCAGCCGCAC CGAAGAGCGA ATGAATTACA GCATCAAGGT GAGAATGCTG
CAACAGGGGA TCAGTGAATT TAGTGGTACC ACCTTAGACC TGTCCGTCAG CGGCGCTCGT
ATTAAACTCG ATGTCAACCA AGTCATTGAC ACTGACAGAC CATTAATCGT TAAACTCAGC
GCGCTGAATG AAGATGAGTA CTTTGAAGAA TTACAACTTG GTGTCGAATA TAAAGTTGTA
GATTTACAAC ACAATAGTAA AGACACCATC ATCAGGCTCA AGCGACTAGG CAATGCTGAA
TCATTGGACA AACTCATCCA TGAGCTTATT GACAGTTATA AATATCGCTA CAAGTTAGAT
GTCAACGATG TGTTTGTTAC AGCCACAGGC CTTGGATTTG AGCGTCATTA TTTACCTTTA
TTTAAGCATT TGCCTCTGTA TTTGACCTTA GAGCAACAGC AGTATCAAAT CAGTCATGAG
CTACTCAATG TGGGCAACGC TGAGATCCAA AGCTTCTTTA AGGATGAACA CGCAAATTGC
CAATTATCCG CCATGCTCAC AGAGGTGCGA CTCAGTAAAA TAGTCAATCA AGCAGAAGAT
CCTAATCACA GATTATTCTT TTGTTTTACC CACAACGCAA ATGGGCGAGT TCATTTCTAT
TCAGCCAGCC TTGCCGAGCT TATCCAAACC CAAACTCAAG CCTTGTTCTT TGGATTTGGA
GCCAAAAAAG ACAGCTGGCG AGTGTTTAAA TTAAACCTGC ATCAAATCGA TCATCAGCAG
CATTATAAAA GTTCAACCTT ACAAGGTGAT GACCCGCTTT ACTCTGCCGA TACCGAGCAA
GAACTTAAGC AGATGACCCA TGTACTGCAA TTACAGGATG TCACTAATCC CAGTATTAAA
GAGCATTATC AGGCTTGGGT TTATTACAAT GATGTCAACG ATCTCAAAGC CTTTGCCCAA
GCTAAAGTAA AGAATAACAG TGTTAAACGC TTGTCTATGC CTTTTAGCGA ACGTCGTCAT
GAAGCCAGGT ACAGCTTTAA ATCCAGCGTA GATATCAGCC AAGGGGATAA AAAAGCCAGC
GGCATAAGTT GTGATATATC AAGCCGTGGT TTGCAAATCA AACTCGATGA CAAAATTGAC
TTCACATGCC CTGCTGCTGT GCAGCTTAGT TTCCCTAAGT TACAAACCAT TGCAGGCAAT
GTGCAGTTAG ATCAGCTTAA TTATCAGCTG GTTCAGACAC GCTACCAAGG TACACATTTG
CATTTAAGCG CCATACTCGG CCACACCCCC CATGTGGGTG TTGAGTTTAT GAATAAGCTT
ATTGCCCAAA ATAAGGGCAA GCTGACTCAA TTATCAGAAC CTAATGGGGC CCTTAAAGAG
CTTTCGGATG GGATGAAAAA TCTGTTAACT CGCCAATTTG CGGGCGTGCC TTTCTTTATT
GAAAAAACCA GCAAATCGGC AAAAATAGCT TGCCTAGGCA TAGGCACTAA AGTCGATGAC
ATCAGTCACT TGTTTGCCGC TGGAACAGAG AATACCTTGC AGTATAACTT AGGTCCGTTG
CTGGAAAACG GTCAATTTAA GCAACATTAC CTTGAACCCT GCAAGAAAAT GAAGCATCAA
CACAGATTGA ATTTCTTCGA AGTCTTCATA CAAGTGAAGC ATCATGCCAG GGGCTCAATT
AGCCTCACCA CACGTCACCT CGACGAGTTA ATCAGCAAGG AAGCCCAGCT GCAATTTATT
CGTGGCGGGC AAAAAGCAGG AAAATTTACC GCCCTACGTA TCTACATAGG TGCAGCAGAG
AAAAGTGATT TATCTTATAT ACGCCGCGAG CTTGAATATA TTACCTCTCA GGCTAAGCAT
AAAGCTCATC AGCTTGAGGA AAGACTTAAT AGCATCATAG GGGTCGGTGA GCTACTGGAT
GTCACTCAAG AAGTCTTGTG TCGTTATCCT GAATTAACTA TAGAACAGTA A
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| Protein sequence | MSLDNHNALI EQLKPLLMEP DFQEIFTQLT ADESNSTRFL IKMELNRLAG ICTRIIDMRG
KSELECQEIS LGGVTHFLDE PAQNALLQAL PLYRNKYTLG VYEHVIKAHK KYLYKQQFLQ
SKAQSGTQDV NEFVVPAVVL GNYFSRTEER MNYSIKVRML QQGISEFSGT TLDLSVSGAR
IKLDVNQVID TDRPLIVKLS ALNEDEYFEE LQLGVEYKVV DLQHNSKDTI IRLKRLGNAE
SLDKLIHELI DSYKYRYKLD VNDVFVTATG LGFERHYLPL FKHLPLYLTL EQQQYQISHE
LLNVGNAEIQ SFFKDEHANC QLSAMLTEVR LSKIVNQAED PNHRLFFCFT HNANGRVHFY
SASLAELIQT QTQALFFGFG AKKDSWRVFK LNLHQIDHQQ HYKSSTLQGD DPLYSADTEQ
ELKQMTHVLQ LQDVTNPSIK EHYQAWVYYN DVNDLKAFAQ AKVKNNSVKR LSMPFSERRH
EARYSFKSSV DISQGDKKAS GISCDISSRG LQIKLDDKID FTCPAAVQLS FPKLQTIAGN
VQLDQLNYQL VQTRYQGTHL HLSAILGHTP HVGVEFMNKL IAQNKGKLTQ LSEPNGALKE
LSDGMKNLLT RQFAGVPFFI EKTSKSAKIA CLGIGTKVDD ISHLFAAGTE NTLQYNLGPL
LENGQFKQHY LEPCKKMKHQ HRLNFFEVFI QVKHHARGSI SLTTRHLDEL ISKEAQLQFI
RGGQKAGKFT ALRIYIGAAE KSDLSYIRRE LEYITSQAKH KAHQLEERLN SIIGVGELLD
VTQEVLCRYP ELTIEQ
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