Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_1033 |
Symbol | |
ID | 4017078 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | + |
Start bp | 1182706 |
End bp | 1183617 |
Gene Length | 912 bp |
Protein Length | 303 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 637955025 |
Product | hypothetical protein |
Protein accession | YP_562044 |
Protein GI | 91792393 |
COG category | [R] General function prediction only |
COG ID | [COG4757] Predicted alpha/beta hydrolase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGAACCCGA AAGCCATATC TCAGCAATCT CTGTTTATTC CTTATCGAGG AGGGCAGCTG CATTTACGTC ATATCGCCCC CAAAGCTCAG CACACTAATA ATACGCCTAT TCTGATGCTC CATGGCGCCA TGTCCAATGG GCGGGTGTTT TACAGTGACT CGGGTCGAGG CCTAGGTTGC TTTATGGCGG CGGCAGGTTT TGATGTGTAT GTGCTGGATA CCGCCGGACG TGGCCTGAGT GGACCTAGAG TTTCTAGAGG CTTTGAATTG GGTCAAGGCG AGGTTATTCG TGAGCAATTG CCTTTAGTCC ATGATTATAT TCTCTCTCGC CACCCCTTAG TGGATAAAGT GCATTGGTGT GGTCACTCTT GGGGCGGGGT CTTAATGGCC AGCGCCTTAG TACGCCATCG GGATTTACAA CAAAGTGTGG CCTCCCTGCT GACCTTTGGG ACTAAACGCA CCATTAAAAT TCGCTCGGTT CGCAAGTGGC TAATGGTGGA TCTCTTCTGG AATCGTGTCG CCCCCGCGCT GAGTTTTTTT CAGGGCTATC TTGCCGCCGA TAAACTGGGG CTTGGGATGG ATAACGAAAG CCGCGCCTCG TTATTGCAAA GCATCGACTG GGTGAGGGGA GATTGGGTCG ATCATGATGA CGGTTTTGAT TATGCTAAAG CCGCCAATAA AACCCTGTGG CCTAAGACCT GGTTTATTGC AGGTCATAAG GATAAAGTGC TTGGCAATCC CAGTGATGTG AAAGACATGT TGGTCGAATG CGGCATGAAT TCCCCTAAAT ACACTCTACT TGCCAAGGAA AGCGGCTATT TATACGATTA TGGCCATGCG GACATGTTGA CTCACGGGCA GGCGGTGGAC GATCATTTCC CGCAAATTGC TCACTGGTAT CAAGAGGCTT AG
|
Protein sequence | MNPKAISQQS LFIPYRGGQL HLRHIAPKAQ HTNNTPILML HGAMSNGRVF YSDSGRGLGC FMAAAGFDVY VLDTAGRGLS GPRVSRGFEL GQGEVIREQL PLVHDYILSR HPLVDKVHWC GHSWGGVLMA SALVRHRDLQ QSVASLLTFG TKRTIKIRSV RKWLMVDLFW NRVAPALSFF QGYLAADKLG LGMDNESRAS LLQSIDWVRG DWVDHDDGFD YAKAANKTLW PKTWFIAGHK DKVLGNPSDV KDMLVECGMN SPKYTLLAKE SGYLYDYGHA DMLTHGQAVD DHFPQIAHWY QEA
|
| |