| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_1027 |
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| Symbol | |
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| ID | 4017072 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 1175117 |
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| End bp | 1176334 |
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| Gene Length | 1218 bp |
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| Protein Length | 405 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637955019 |
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| Product | phosphopentomutase |
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| Protein accession | YP_562038 |
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| Protein GI | 91792387 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1015] Phosphopentomutase |
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| TIGRFAM ID | [TIGR01696] phosphopentomutase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACGTA CATTTATTTT AATGCTGGAT TCTTTTGGCA TAGGTGCCGC CAGCGATGCC
GACAAGTTCG GCGATATCGG CGCTGACACC TTTGGCAACA TTGCCAAGGC CTGCGCCGAA
GGCAAGGCTA ATATTGGCCG TGATGGTAGC CTAAAATTGC CTAACTTAGC CAAACTTGGC
TTAGGCCATG CGGGTTTTGA GAGCACAGGG CAGTTTGCTC CTGGTTTTAG CCAAGATGTT
GAAGTGGTTG GCGCTTATGG TTACGCCGAT GAGTTGAGCA CAGGTAAAGA TACCCCAAGC
GGTCACTGGG AAATGGCCGG TGTTCCCGTG CTCTATGACT GGGGTTATTT CAATGATTTG
CAAGACTCCT TCCCAAAAGA ATTGACCGAT AAAATTTTAG CTCGCGCAGG CCTTAGCGGT
TTCTTAGGCA ATTGTCATGC TTCAGGCACT ACAATTCTTG AGCAGTTAGG TGAAGAGCAC
ATGCGTTCTG GCATGCCGAT ATTCTATACC TCGGCAGATT CTGTGTTTCA GGTCGCCTGC
CACGAAGAAA GCTTTGGTTT AGATAACCTA TTACGCCTGT GTGAAATTGC CCGTGAAGAG
CTAGGCCCTT ACAACATAGG TCGGGTTATC GCCCGTCCAT TTATTGGCAC AGGCCCAAGT
GATTTTTCTC GTACAGGAAA TCGTCGTGAT TACGCCGTCG AGCCACCTTC GAAGACAGTG
CTGGATAAGC TTAAGGACGC TGGCGGTGAA GTGGTCAGCG TCGGCAAGAT TGCCGACATC
TATGCTCACT GCGGTATCAC CAAAAAAGTC AAAGCCAGTG GCTTAGAGGC ATTATTTGAT
GCCACGCTTG AGCAAATCAA GCAAGCCGGT GACAGAACCA TAGTATTTAC TAATTTCGTT
GATTTTGATT CACATTATGG CCATCGCCGC GATGTGGCAG GCTATGCTAA AGCATTGGAG
TATTTTGATG AACGCTTGCC TGAGCTGTTG GCCTTGTTGG AGCAAGATGA TTTATTGCTA
CTGACTGCCG ATCACGGCTG CGATCCCACT TGGCCTGGTA GTGACCACAC CCGCGAGCGA
GTGCCGGTCT TAGCATTAGG CGCAGGCCTT GCGGCAGGCT CACTGGGGCT GCGTAACAGC
TTTGCCGATA TGGGGCAGTC TATCGCCAGC TATTTTGAGC TGGAACCGAT GGAATACGGC
GAATCATTTA TTCAGTAA
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| Protein sequence | MKRTFILMLD SFGIGAASDA DKFGDIGADT FGNIAKACAE GKANIGRDGS LKLPNLAKLG
LGHAGFESTG QFAPGFSQDV EVVGAYGYAD ELSTGKDTPS GHWEMAGVPV LYDWGYFNDL
QDSFPKELTD KILARAGLSG FLGNCHASGT TILEQLGEEH MRSGMPIFYT SADSVFQVAC
HEESFGLDNL LRLCEIAREE LGPYNIGRVI ARPFIGTGPS DFSRTGNRRD YAVEPPSKTV
LDKLKDAGGE VVSVGKIADI YAHCGITKKV KASGLEALFD ATLEQIKQAG DRTIVFTNFV
DFDSHYGHRR DVAGYAKALE YFDERLPELL ALLEQDDLLL LTADHGCDPT WPGSDHTRER
VPVLALGAGL AAGSLGLRNS FADMGQSIAS YFELEPMEYG ESFIQ
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