Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_0986 |
Symbol | |
ID | 4016756 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | + |
Start bp | 1124914 |
End bp | 1125522 |
Gene Length | 609 bp |
Protein Length | 202 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637954976 |
Product | Na(+)-translocating NADH-quinone reductase subunit E |
Protein accession | YP_561997 |
Protein GI | 91792346 |
COG category | [C] Energy production and conversion |
COG ID | [COG2209] Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrE |
TIGRFAM ID | [TIGR01940] NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.00118082 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAACATT ATATTAGTTT ATTAATTCGC TCTGTCTTCA TTGAAAACAT GGCGTTATCC TTCTTCTTAG GTATGTGTAC TTTCTTAGCT GTGTCTAAGA AAGTCACCAC TGCGATGGGA TTAGGTGTGG CGGTTATCGT GGTACTTGCG ATTTCTGTAC CTGCTAACCA AATCATCTAC CAAGGTATTT TAGCGCCGGG CGCATTAGCT TGGGCTGGTG TTCCTGATGC AGATTTGAGC TTCTTGAAGT TCATTACCTT CATCGGTGTT ATCGCGGCTT TGGTGCAAAT TCTGGAAATG ACCTTAGATA AGTATTTCCC GCCTTTGTAC AACGCCTTAG GTATCTTCTT ACCACTTATC ACAGTGAACT GTGCCATCTT CGGTGCGGTT GCTTTCATGG TTGAGCGTGA TTACAACCTA ACAGAAAGTT TAGTGTTTGG TGTAGGTTCT GGTATCGGTT GGGCACTGGC CATAGTTCTA CTGGCCGCTG TTCGCGAAAA GATGAAGTAT TCTGATGTGC CAAATGGGCT ACGTGGTTTA GGTATTACCT TTATCTCTGC AGGCCTAATG GCATTAGGTT TCATGTCGTT CTCAGGTGTG TCTCTTTAA
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Protein sequence | MEHYISLLIR SVFIENMALS FFLGMCTFLA VSKKVTTAMG LGVAVIVVLA ISVPANQIIY QGILAPGALA WAGVPDADLS FLKFITFIGV IAALVQILEM TLDKYFPPLY NALGIFLPLI TVNCAIFGAV AFMVERDYNL TESLVFGVGS GIGWALAIVL LAAVREKMKY SDVPNGLRGL GITFISAGLM ALGFMSFSGV SL
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