Gene Sden_0850 details

Gene Information

• Locus tag: Sden_0850
• ID: 4016814
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella denitrificans OS217
• Kingdom: Bacteria
• Replicon accession: NC_007954
• Strand: +
• Start bp: 972869
• End bp: 973504
• Gene Length: 636 bp
• Protein Length: 211 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 637954840
• Product: lysine exporter protein LysE/YggA
• Protein accession: YP_561861
• Protein GI: 91792210
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG1280] Putative threonine efflux protein

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.0203758
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATTGATT TGGCTCTGCT TCCTGTTTAT TTGACCACAG TGGTGGCCCT GTTGTTAATT 
CCTGGTCCCG ATATGCTGCT TATCGCCAGC TCTAGCCTGA GCTATGGCCG CAAAGTGGGC 
GTGTATGCAA GCTTAGGCAA TGCCACCTCT GGACTGATAT TAACCTTGCT TGCCGCAATG 
GGGGTCTCAG CCTTAGTGGC CATGCATCCT CTGGCTTTAG AAATACTGCG AGTATTGGGC 
GGGGCGTATT TACTCAAAAT GGGCTGGGAT TGCATGCGCA GCAGCGGCAG CGATGCCCCA 
GAAATTGAAC AACAGCATAA CCTGGCTAAA TTGCTTTACC GCCGCGCGGT GATGAGCAAC 
CTGCTTAACC CTAAGGCATT GATCTTTTTT GTTTTGTTTT TACCTCAGTT TGTCTCTACC 
CAGCTGAGCG CTAGTTCTGG CGAACAAATG TTGGCGCTGG GCCTGTTACT GAATGTGATG 
GGCTTAAGCT TCAACTTGCT GCTGGTGGCC CTGGTGGGCA CCTTAGGCAA GCCCTTACTT 
CACAATGACA AGTTTCGCAC CTATCAGAAC AAGTTTATGG GGATGATATT TTTTGCCTTG 
GCTATCTGGT TGCTGGCTTC CCAAGTGCCA TATTGA 

 

Protein sequence

MIDLALLPVY LTTVVALLLI PGPDMLLIAS SSLSYGRKVG VYASLGNATS GLILTLLAAM 
GVSALVAMHP LALEILRVLG GAYLLKMGWD CMRSSGSDAP EIEQQHNLAK LLYRRAVMSN 
LLNPKALIFF VLFLPQFVST QLSASSGEQM LALGLLLNVM GLSFNLLLVA LVGTLGKPLL 
HNDKFRTYQN KFMGMIFFAL AIWLLASQVP Y