| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_0846 |
|---|
| Symbol | |
|---|
| ID | 4016810 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella denitrificans OS217 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007954 |
|---|
| Strand | - |
|---|
| Start bp | 969067 |
|---|
| End bp | 970449 |
|---|
| Gene Length | 1383 bp |
|---|
| Protein Length | 460 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 637954836 |
|---|
| Product | amidohydrolase |
|---|
| Protein accession | YP_561857 |
|---|
| Protein GI | 91792206 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG1228] Imidazolonepropionase and related amidohydrolases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAATTAT TATGGAAGCA TTCGCTCGCC TTCATTTTAC TGCTCAACTA TTTAGTACTA
AATTCAGATG CGAGCGCCGC AGAGCGTTGG TTCTTAAACG CCTCTGTACT TGACCCTAAC
TCTAAAGACG TCATATTAAG GCAGGTGTTA GTCCGTGATG ATCAAATCAT TCAAGTGATT
GAGACTGTCC CAGAAGATGA CGGTATTGCG CGGGAGGACT TGGGCGGCGA TCTTATGTTG
CCCGGCATGA TAGACATGCA CACCCATGCC TGGGGAAATG GCTCACTTAC CCATAATGAG
GGTTACCAAT ACATAGGCAT AAGAGGTACT TTAAACGCCA TGCTTTACGC TGGAGTGCAC
GGTGCGCTGG ATTTATTCGG CAAGGAAGAT CAACTGCTTG ATTACCGCGA TAACCAATAC
TCAAGCATAA GGGATGAAGC ACAGCTGTTT GCCGCAGGCC CTTGCTTCAC AGTCACCACT
GGTCACTGCT CCATGATGGG CATTAAGACC CGCATTATAG ATTCGCCCGA GCAAGTCGTG
CCTGAAGTAC AAGAGCTTGC AGCTAAACAG CCCAATGTAC TCAAAGTCGT CTTAGAGCAG
GAGCATCCTA GAAGACCCAC TGTATCCAAA GAAACCCTGC AAGTATTTCT GGCCGAAGCA
AAGAAACTCA ATATCCCCTC AGTGGTTCAC GTGGGAAGCT GGGCTGATGT GCGAACCGCG
AGTGAACTTG GGGCAAATGC CATTACCCAT CTCCCCCTTA CACCTATGCC AGAGGATATC
CCTGCGTTGC TAAAGGCCAA CGACACCGCA ATTATTACCA CTGTGGGTGT GATCCTTGAA
ACTCAGAGAT TATTCAAAGA AGTCCCCAAG AGTCATACCG ATGAGTTAAC CCGAACCTTG
GTTAAACCCG CCATACTTGA GCAGTTTCCC GTTGAGAAAA ACAGTAAAGG TCAAGTTGAC
TGGCTAAGGT CTGAAAAGTG GTTGCACGCC AAGGTTAATG CCACGCATTC GCTTACTACA
CTTGTTGCCC AAGGAGTCAC CATCATTGCC GCCTCAGATA GCGCCAACTT AACTATGTAT
CAAGGGGTTG GTCTGCACAC TGAGCTATTC CATTTACAGC AATTAGGCAT GTCAGCTAAA
GACATTTTAC TCTCCGCAAC CCATGAGGCT TATCAGTTTT TGGGGATTAA TTGGGGCATT
AAAGCGGGCG CTAAGGCAAA CTTTATCATT TTGCCCTTAG AGGTGACCCA AGACATAACA
AAAACCGTTG AATTTAAACG CATTTATTTA GAAGGTCGTG TGGTCGATAG AGAAAAATTA
CTCACCTACG CCATCCCAGA TTGGTGGCAA TACAGCAAGT TGCTTATTGG GGTAGAAGAT
TAA
|
|---|
| Protein sequence | MKLLWKHSLA FILLLNYLVL NSDASAAERW FLNASVLDPN SKDVILRQVL VRDDQIIQVI
ETVPEDDGIA REDLGGDLML PGMIDMHTHA WGNGSLTHNE GYQYIGIRGT LNAMLYAGVH
GALDLFGKED QLLDYRDNQY SSIRDEAQLF AAGPCFTVTT GHCSMMGIKT RIIDSPEQVV
PEVQELAAKQ PNVLKVVLEQ EHPRRPTVSK ETLQVFLAEA KKLNIPSVVH VGSWADVRTA
SELGANAITH LPLTPMPEDI PALLKANDTA IITTVGVILE TQRLFKEVPK SHTDELTRTL
VKPAILEQFP VEKNSKGQVD WLRSEKWLHA KVNATHSLTT LVAQGVTIIA ASDSANLTMY
QGVGLHTELF HLQQLGMSAK DILLSATHEA YQFLGINWGI KAGAKANFII LPLEVTQDIT
KTVEFKRIYL EGRVVDREKL LTYAIPDWWQ YSKLLIGVED
|
|---|
| |