| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_0817 |
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| Symbol | |
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| ID | 4017040 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 936051 |
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| End bp | 937286 |
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| Gene Length | 1236 bp |
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| Protein Length | 411 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 637954801 |
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| Product | UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase |
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| Protein accession | YP_561829 |
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| Protein GI | 91792178 |
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| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0654] 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases |
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| TIGRFAM ID | [TIGR01988] Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0219172 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAGATG GACGGGGGCA AGATGGACAG GGACAAGACG AACAAGGCCA GGCTTTAGAG
CGCCAAGTGG TCGATGTTAT CGTTATTGGC GGTGGCATGG TGGGCGCGGC AACGGCGCTT
GGGCTGGGTC AGCTTGGGCT TAAAGTGGCC TTGGTAGAGT CTCGAAGACC CCAGGCTTAT
GATCCCAGCC AAGCGCTAGA TTTAAGAGTC AGCGCCATCA ATATTGCCTC TGAGCAACTG
CTTAGCCGTT TAGGGGCAAT GGATCAATTG AAACAGTGGC GCCATGCTCC CTACCTTGGG
CTTGAAACCT GGGAAATGCC AGACTGCATC ACACGCTTTC ACGCAAAAGA TATTAACGTC
CCTCACTTAG GTTACTTCTT CGAGAATCGG CTTATTCAGT TATCCCTGTG GCAGCAGATA
GCACAGTTAA GTCAGCTGAG CCTGCATTGC CCGAGCAAGG TGAAGCAAAT TAGCCGCAGC
CATGACGATA GCATTTACGT GAGCCTTGAT GATGGCACTG AACTTGAGGC TAAATTATTG
GTCGGCGCCG ATGGGGCCAA CTCCCAAGTG CGCCAGTGGG CAGGTATAGG CGTAACGGGT
TGGGATTACG CACAAGCGGC CATGCTGATT AATATTGATA CCAAGGCTCC CCAGCAAGAT
ATCACCTGGC AACACTTTAC TCCCCAAGGG CCGCGCAGCT TACTGCCGCT GCCTGGCAAT
CATGCCTCCC TTGTTTGGTA CGATGATGCT AACCGCATTA GTCAACTAAT GCAGCTGAAT
CATGAGCAAT TGGCTGAGCA AATCAGAGCC CATTTTCCCA GCCGCCTAGC GCCAGAGTTT
AGTGTCAGCG CCCGCGGCAG TTTCCCACTG ACTCGCAGAC ATGCCCAAGC GTATTATCAA
GCTAATCTTG TGATTTTAGG GGATGCGGCC CACACCATTA ACCCGTTAGC TGGGCAGGGA
GTCAATATAG GTTTTAAGGA TGTGGACGCC TTATTGAACA CGCTTGCCAG CGCCATAGGC
GAGGGGGAAA TATGGTGGCA GCTTGATACC TTGGCGAAAT ACCAGCAAGT AAGGCGAGCT
GAAAATCGCT TGATGATGAC GGCAATGGAC GGGTTTTACA GCGCCTTTAG CAATGATTTA
TTGCCCCTTA AACTCTTACG TAATGGCTTG TTGAAAGTGG CGAATATCGA CTCTCCCATT
AAACGGCGAG TCCTGAAGCA TGCCTTGGGG CTCTAA
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| Protein sequence | MQDGRGQDGQ GQDEQGQALE RQVVDVIVIG GGMVGAATAL GLGQLGLKVA LVESRRPQAY
DPSQALDLRV SAINIASEQL LSRLGAMDQL KQWRHAPYLG LETWEMPDCI TRFHAKDINV
PHLGYFFENR LIQLSLWQQI AQLSQLSLHC PSKVKQISRS HDDSIYVSLD DGTELEAKLL
VGADGANSQV RQWAGIGVTG WDYAQAAMLI NIDTKAPQQD ITWQHFTPQG PRSLLPLPGN
HASLVWYDDA NRISQLMQLN HEQLAEQIRA HFPSRLAPEF SVSARGSFPL TRRHAQAYYQ
ANLVILGDAA HTINPLAGQG VNIGFKDVDA LLNTLASAIG EGEIWWQLDT LAKYQQVRRA
ENRLMMTAMD GFYSAFSNDL LPLKLLRNGL LKVANIDSPI KRRVLKHALG L
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