Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_0765 |
Symbol | |
ID | 4016604 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | + |
Start bp | 885436 |
End bp | 886335 |
Gene Length | 900 bp |
Protein Length | 299 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637954750 |
Product | LysR, substrate-binding |
Protein accession | YP_561778 |
Protein GI | 91792127 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.960601 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGATAAAC TACGTGGGAT GCAACTCTTT GTCCGCTTAG CCGATTTAGG CAGTTTTACT CGCGTCGCCG AGCAAACCAA TAGCTCTAAA TCCATGGTAA GTAAGGAAAT CAGCCGATTA GAGGCCGACT TAGGCGCCCG TTTATTGCAT CGTTCTACCC GAAATGTGCA ATTAACCCCT GTGGGGGAAG GTTACTTAGT GCGTGCTAGA GAGATACTGG CAAAACTTGC TGACGCCGAG AGCTTTGCCC AAGATCAGCA GTTGAATTTA CGGGGAAAGC TTAAAATAAA TGCCCCTATG GCCCTGGGCA TTACCGACTT GTCTAGCCTA TTTGCCGATT TCATGCAGGC CCACCCAGAG ATAGAACTCG ACATTCACTT AGGGGATGAA AGCATTGATC TGGTAGAGCA AGGGTTTGAT CTTGGTTTTC GCGCCTCGAG TACCCCCATA GATTCTAATT ATGTGGGCAG AGCGCTAACG GCTTTTACCT ATCGAGTTTG TGCCTCTCCT GACTACCTAA AACAGCACCC TAGTATTGAT TCACCTGAAG ATCTGCAAGC GCATAACTGT TTTGTATACA GCTATTTTCA TGGAAAAAAT ATCTGGCCAA TTGAAGATGG GGTGGCAGTG AAAGGCAATT TACAGGTGAA TAGCACCCTA TTTATGATGG AGTCGATTAA GAAGGGCCTT GGACTCGGCT TTATTCCTGA TTTTGTCTGT CAGCAGGCAA TCGACAGCGG CCAAGTGGTT GAAGTATTAG CCGATGCAAA AAAACCTAAG CTCACGCTCT ATGCCTTATA TCCAGCGCGA CATTTTGTCC CAGCCAAGTT AGTAGAATGC ATTGAATATT TAACTCTTTG GTTTGCTAAT AAAAAATTAC TCCAAATGCA TAAGCGCTAA
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Protein sequence | MDKLRGMQLF VRLADLGSFT RVAEQTNSSK SMVSKEISRL EADLGARLLH RSTRNVQLTP VGEGYLVRAR EILAKLADAE SFAQDQQLNL RGKLKINAPM ALGITDLSSL FADFMQAHPE IELDIHLGDE SIDLVEQGFD LGFRASSTPI DSNYVGRALT AFTYRVCASP DYLKQHPSID SPEDLQAHNC FVYSYFHGKN IWPIEDGVAV KGNLQVNSTL FMMESIKKGL GLGFIPDFVC QQAIDSGQVV EVLADAKKPK LTLYALYPAR HFVPAKLVEC IEYLTLWFAN KKLLQMHKR
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