| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_0744 |
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| Symbol | |
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| ID | 4016850 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 864540 |
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| End bp | 865775 |
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| Gene Length | 1236 bp |
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| Protein Length | 411 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637954729 |
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| Product | ATP-dependent RNA helicase SrmB |
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| Protein accession | YP_561757 |
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| Protein GI | 91792106 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTATTTG AAGATTTCCA CCTCGATCAC AGTCTACTCG ACTCACTCAA GGCCATGGGG
CATAACACCC CGACCACTAT TCAGCAACAA ACCATACCTT TGGCCATGGA GCAGGAGGAT
ATTCTTGCTA AAGCCCCGAC TGGAACCGGA AAAACTGCCA GCTTTCTCTT GCCTGCGTTG
CAACACCTTA TCGATTTCCC GAGACGTTTC GACGGCCAAG CTAGGGTGTT GGTCCTAACT
CCTACCCGTG AATTAGCCAG TCAAATTCAT CGCTACGCCT GCCATTTGGC AACCGATTTG
GGCTTAGACA TCAGTATTGT CACAGGTGGC GTCCCTTATG GTCCTCAGGA AGAAGCCTTA
GCGGGCAATG TCGATATCAT GATCGCCACA CCCGGCCGTT TGATGGAATA CCTGGATAAG
AACAAATTTG ATGCGACCGA AGTCGAGATC ATGGTCATAG ATGAAGCCGA TCGCATGTTA
GACATGGGTT TCTCCTCTGT GGTGAAAACC ATAGCTATCG AGGCTCAAGG TTGTAAGCAA
AAAATGCTTT TCTCTGCCAC TTTAGAGGGC GGCGGTGTAC AACGTTTCGC CCGTGAGTTA
TTGGACGATC CTGTCACTGT CGATGTGGAA GCTCCTCGCA GCGAAAAAGC CAAAATCCAC
CAATGGATCC ACTTGGCTGA TGATCAAACC CATAAGTTTG CTCTGTTATG CAACTTATTA
CGCCAAGAAT CGGTTAAGCG CACCATAGTA TTCGTCAAGA CTCGCGAAGT GGTGGCAAGC
CTTGAAGGGC TGCTGCTTAA AGAAGGTATT TCTTGTGCCT TTATGCGCGG TGACATGGAA
CAGAAAAAAC GCTTCCAAGC CTTAGGCCGC TTTACTAAAG GCGAAGTGGA TATTTTGCTC
GCCACAGATG TAGCCGCCCG TGGCATAGAC ATTGACGATA TCACTCATGT GATCAACTAC
GACATGCCCC GCTCAGCCGA TGCTTATGTG CATCGCATAG GCCGTACTGG CCGCGCTGGC
GCCAAAGGCA CCGCCATCTC GTTAGTTGAA GCTCATGATA TGCGTATCGT CAGCAAGATT
GAGCGTTATA TTGAACAGCC GCTAAAGCGT CGCGTGATCG AAGAGCTGCG TCCGAACAAT
AAAGAAGCTA AAGTACCCGG CAAGAAAAAG GCCAATGCAA AAGATGCAAA ACCTTCTTCG
AAGAAATATA AGAAGCCAAA AAAGAAATCA TCATAG
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| Protein sequence | MLFEDFHLDH SLLDSLKAMG HNTPTTIQQQ TIPLAMEQED ILAKAPTGTG KTASFLLPAL
QHLIDFPRRF DGQARVLVLT PTRELASQIH RYACHLATDL GLDISIVTGG VPYGPQEEAL
AGNVDIMIAT PGRLMEYLDK NKFDATEVEI MVIDEADRML DMGFSSVVKT IAIEAQGCKQ
KMLFSATLEG GGVQRFAREL LDDPVTVDVE APRSEKAKIH QWIHLADDQT HKFALLCNLL
RQESVKRTIV FVKTREVVAS LEGLLLKEGI SCAFMRGDME QKKRFQALGR FTKGEVDILL
ATDVAARGID IDDITHVINY DMPRSADAYV HRIGRTGRAG AKGTAISLVE AHDMRIVSKI
ERYIEQPLKR RVIEELRPNN KEAKVPGKKK ANAKDAKPSS KKYKKPKKKS S
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