| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_0708 |
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| Symbol | |
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| ID | 4016909 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 816931 |
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| End bp | 817863 |
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| Gene Length | 933 bp |
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| Protein Length | 310 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637954693 |
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| Product | Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase |
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| Protein accession | YP_561721 |
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| Protein GI | 91792070 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1560] Lauroyl/myristoyl acyltransferase |
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| TIGRFAM ID | [TIGR02207] lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000000260022 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTTAGTTG TGGTCGAAAA AGCTCAGTTT TCTACTCATT TGCTCCATCC TAAGTATTGG
TTATTATGGT TTGGTGTTGC GCTTATGCGT ACCACGCAGG TCTTGCCATT GCATTTGCAA
ATGAAACTAG GCGCATCCCT TGGTCGCCTA GTGATGCGAC TTGCCGGCAG CCGCACTCGC
ACAGCGAAAC GCAACATCAG CCTTTGCTTC CCACAGATGA GTGCCCAAGA ACAGCAAACC
TTACTGGTAC AGAATTTTGA AGAAACCGGC AAAGCGCTAT TCGATACCAT CAATGCTTGG
TGGTGGTCCG ATGAAAAAGT TCAGCGTCAT ATGCAGATAA CAGGCGCTGA ACATATCACT
GACATCCTTG CCGATGGCCA AGGGGTGATT TTATTTGCCG TTCACTGTTT ACCCCTTGAG
ATGGGCGGAC GCATGTGTGG TCAATTTAAC CCTAGTATTG GTGTTTACCG TCCCCACAAC
AATCCACTGA TGGAATACCT ACAGGTCAAA GGCCGTTTGC GCTCAAACAA AGGATTAGTA
TCAAAACGAG ACTTGCGCCA AATGGTACGC AGCCTAAGAG GCCCTAATGC CGTCTGGTAT
ACAGCAGATC AAGACTTTGG CCGCTCAAGT GCGGTATTCA TTCCCTTTTA TGCCGTGCCG
GAGGCTGCCA CCATCACTGG AGCCACCACC TTAGCCAAAT TGGGTAAAGC CAAAGTGTTA
CCCTTTTTTG TCGAGCGCAA TCAAGATGAC ACAGGTTATC GTATTGAAGT CATGCCAGCG
CTAGAGAATT TCCCAGGTGT TGATGAAGTC AGCGATGCCC TGCGTGGAAA CCAAATTATA
GAACAGCTTA TCGATAAGAA TCGCAGCCAA TATATGTGGC TACACAGGCG CTTTAAGACT
CGCCCCAATG AAAATGACCC TTCGCTCTAT TAA
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| Protein sequence | MLVVVEKAQF STHLLHPKYW LLWFGVALMR TTQVLPLHLQ MKLGASLGRL VMRLAGSRTR
TAKRNISLCF PQMSAQEQQT LLVQNFEETG KALFDTINAW WWSDEKVQRH MQITGAEHIT
DILADGQGVI LFAVHCLPLE MGGRMCGQFN PSIGVYRPHN NPLMEYLQVK GRLRSNKGLV
SKRDLRQMVR SLRGPNAVWY TADQDFGRSS AVFIPFYAVP EAATITGATT LAKLGKAKVL
PFFVERNQDD TGYRIEVMPA LENFPGVDEV SDALRGNQII EQLIDKNRSQ YMWLHRRFKT
RPNENDPSLY
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