| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_0697 |
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| Symbol | |
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| ID | 4016898 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 804746 |
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| End bp | 805435 |
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| Gene Length | 690 bp |
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| Protein Length | 229 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637954682 |
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| Product | PspA/IM30 |
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| Protein accession | YP_561710 |
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| Protein GI | 91792059 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG1842] Phage shock protein A (IM30), suppresses sigma54-dependent transcription |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.000488945 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGGTATTT TAAATAAGAT TCTAACTGCG TTTCGCGGTG GTGCAACCGA AGTTGGCCAA
ACAATCGTTG ACGCTAATTC GACTCGCATT TTTGAACAAG AAATTCGTGA TGCCGAGAAA
CATTTAACCA AGGCAAAGCG TGAACTCACC GACGTGATGG CCAAAGAAAT GCAAGCCAGT
CGTGAAGTTG ACCGCTTAAA ACGCAGCATT GCAGAACATG AAGGCTACGT GACTCAAGCC
CTAGAGAAAG GCAATGAAGC CTTAGCTATC GAAGTGGCTG AAAAGATTGC TCAACAAGAC
CAAGAGCTTT CTGAGCAGCA AAGTGCTAAT GAGAGTTTCT CAGCCCATGC ACTGCGCCTG
AAAGATTTAG TGAAAAAGAC CGAGCGTCAG CTATCAGACT ATCAACGTCA GCTCAGCATG
GTAAAGACCA CTGAAAGCGT GCAAAGAGCC ACAGCGACCA TTACTGACTC ATTTGCATCG
AGCAACTCTA AGCTACTCAA TGCTAAAGAT TCTCTTGAGC GCATCAAGGC ACGTCAGCAG
CAATTTGATG ACCGCCTAAA AGCCTCTGAA ACCTTAGCGG AAGAGAACAG CGACAAGTCA
TTGCACGCTA AGTTGGCAGA AGCCGGCATT GGCGAGCAAA AATCCAGTGC TAATGCCGTG
TTAGATCGCA TTAAAGCACG TAAAGGTTAA
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| Protein sequence | MGILNKILTA FRGGATEVGQ TIVDANSTRI FEQEIRDAEK HLTKAKRELT DVMAKEMQAS
REVDRLKRSI AEHEGYVTQA LEKGNEALAI EVAEKIAQQD QELSEQQSAN ESFSAHALRL
KDLVKKTERQ LSDYQRQLSM VKTTESVQRA TATITDSFAS SNSKLLNAKD SLERIKARQQ
QFDDRLKASE TLAEENSDKS LHAKLAEAGI GEQKSSANAV LDRIKARKG
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