| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_0589 |
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| Symbol | |
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| ID | 4016619 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 672199 |
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| End bp | 673212 |
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| Gene Length | 1014 bp |
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| Protein Length | 337 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637954574 |
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| Product | ornithine cyclodeaminase |
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| Protein accession | YP_561602 |
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| Protein GI | 91791951 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2423] Predicted ornithine cyclodeaminase, mu-crystallin homolog |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 43 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACATCA CCACTGAACT GCGTTACCTA AGTCAATCCG ATATTCGACT GCTTGGCGGC
GATCATAGCC ATGCATTTAT GAGCGCCATT GAAGAGGGAT TGCGTTTACA CGCGAAGCGA
CAATTTGTAC AACCGCTCAA ACCTTACTTA CGCTGGCCAG ATGCGCCACA CATAGCTGAC
CGCATTATTG CCATGCCTTG CTATCTTGGG GGCGATAATC CCATCGCGGG CATTAAATGG
ATTGGCTCAC GTCAACATAA TCCAACTAAA CACCAATTAC CGCGCGCCAG TGCAGTGATC
ATCTTAAATG ATGCTGAAAC TAACTACCCA GTGGCGATTC TTGAAGCGAG TTTAATCAGC
GCCATGCGCA CCGCGGCGAT CACGGGTATT GCGACTAAAT ATTTAGCTAA AGAAAACTTT
AAAGAAGTCA GCATCATCGG CTGCGGCCCC ATTGCGCAAA TGCAAGTGCA AACGCTGCTA
GAACAATATC CGCAGATAAT GATAGTGAAC TTGTACGATC TCAACCCAGC CGCCGCTGAT
ATGTTGATCA GCCAATTTGC TACGCGCTTC CCTAATGTTC ACTTTACCAT TCAAGCCAGT
GCTGAAGCCG CGGTCAAATG TGCCGAAGTG CTGGTCACCT GCACGGTATC GGATGCACCA
TATATCCCGT TCTCCTGGCT ACAACCAGGT TGTTTCGTTT CTAACATTTC CATTATGGAT
ATCGAGAAGG ATGTGTTCTT AAAAGCCGAC AAAGTCATTG TCGATGATTG GGACCAATCT
AATCGCGAAA AGAAAGTCAT CAATCAATTG GTTGAAGAAG GCTTATTTAG CCGTGAGCAA
CTCCACGCCG AACTTGGCGA CATTCTCACA GGTGAAGTTG GCGGACGTGA TAATGACGAT
GAGATCATTC TGCTGAACCC TATGGGAATG GCGATTGATG ATATTGTCTG TGCTCGCTGG
TTCTATCAAG CCGCGCTAGC CAAAGACATT GGTACTCGCT TACCACTGTT TTAA
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| Protein sequence | MNITTELRYL SQSDIRLLGG DHSHAFMSAI EEGLRLHAKR QFVQPLKPYL RWPDAPHIAD
RIIAMPCYLG GDNPIAGIKW IGSRQHNPTK HQLPRASAVI ILNDAETNYP VAILEASLIS
AMRTAAITGI ATKYLAKENF KEVSIIGCGP IAQMQVQTLL EQYPQIMIVN LYDLNPAAAD
MLISQFATRF PNVHFTIQAS AEAAVKCAEV LVTCTVSDAP YIPFSWLQPG CFVSNISIMD
IEKDVFLKAD KVIVDDWDQS NREKKVINQL VEEGLFSREQ LHAELGDILT GEVGGRDNDD
EIILLNPMGM AIDDIVCARW FYQAALAKDI GTRLPLF
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