Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_0535 |
Symbol | |
ID | 4016869 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | - |
Start bp | 602996 |
End bp | 603874 |
Gene Length | 879 bp |
Protein Length | 292 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 637954521 |
Product | hypothetical protein |
Protein accession | YP_561550 |
Protein GI | 91791899 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCTGACTC GTCGCGATTT AATCTTAGTT ATCTTGTTCA GTGCCGCTAT TAACTTACTG CACAGCCCAA GTGTTTATGG CAAAACTGAC TACGATTATT TGCCACAAGA TGAAGTCACC AGCATAGAGG TCGAAGGTCA ACCTCTGCCA GTGTTAGTGC GCCCTTGGGA AGGTAAATTG CGCCTTGGCA GCGTGATTAT CATAGGCCCC TCGGACAGTA ATGCCGATGC GGCAGGCTTT ATCAGTCATC TGCGCAAATC CCTCAACCCA GAAGGTTGGG CTAGCATCAG CCTCACGCCG CCAAAAGGCC TTTATCGTCC AAGTTTTGCC ACTGGGGCTG AAGAAATAGC TAAAGCGGGC AGCGAGCAGC TTAGTGTCAG CGGTTACCAG CCTACCCCCT TGTATAACTC GGCGCAGTTG CTAGAGCTTA GAAACTTCCA ACAAGAAGCA CTGACCAAGA GCTTTACCCC ACTGGAAGCC CTCAGCGATT CCTATACTGG CCTTAAAATG TATTTAGTGT CTGACGACAG CGCAGGTATT CTGGTCAGCT TATTGTTTGA TAAGAAAATT CCAGCACCCG ATGTACTCGT GCTCATCAAC CCTTACCGCG AACATGAAGA GCTTATCGAT GAACCCAGCC GACGTAAAAG CATAGCCCAG CAGTTACTCA TGCAGACTTT TCCTGTGCTG GATCTGCAGT CCCCCAATGG CCACCCAGTG TCCTTAGCCA ATGCACACCA AAGGCAAGCC GTGAACCAGT TGAAATCACC TCGCCTTTAC CGGCAATACA GGCTCAATTT ACGCTTAGAT AACCCCAGTG GCTGGGAAGA AGCTCAGAAC TACATCGAAG GCTTCGCACG TATTGCCACA GGCAATTAA
|
Protein sequence | MLTRRDLILV ILFSAAINLL HSPSVYGKTD YDYLPQDEVT SIEVEGQPLP VLVRPWEGKL RLGSVIIIGP SDSNADAAGF ISHLRKSLNP EGWASISLTP PKGLYRPSFA TGAEEIAKAG SEQLSVSGYQ PTPLYNSAQL LELRNFQQEA LTKSFTPLEA LSDSYTGLKM YLVSDDSAGI LVSLLFDKKI PAPDVLVLIN PYREHEELID EPSRRKSIAQ QLLMQTFPVL DLQSPNGHPV SLANAHQRQA VNQLKSPRLY RQYRLNLRLD NPSGWEEAQN YIEGFARIAT GN
|
| |