| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_0495 |
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| Symbol | |
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| ID | 4017785 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 565676 |
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| End bp | 566638 |
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| Gene Length | 963 bp |
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| Protein Length | 320 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637954481 |
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| Product | K+-dependent Na+/Ca+ exchanger related-protein |
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| Protein accession | YP_561510 |
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| Protein GI | 91791859 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0530] Ca2+/Na+ antiporter |
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| TIGRFAM ID | [TIGR00367] K+-dependent Na+/Ca+ exchanger related-protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.000835013 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTTAGTTA ACATTTTATA TTTAGTGGTC GGTTTAGCCG TTTTGGTCTG GAGTGCCGAT
CGTTTCGTCT ACGGCGCCGC CGCCTTTGCC CGTAATCTTG GCCTTCCGCC AATGTTAATC
GGCTTAACCA TAGTGGCCAT GGGCAGTTCA GCTCCTGAAA TGTTTGTCGC TGCCACCGCA
TCCATGGAAG GCATGAGCGA CACAGCCATA GGTAATGTCC TCGGATCTAA CGTCGCCAAT
ATTACCCTGA TATTAGGTAT TACCGCGCTA CTGGGTGCAC TTTCTGTCAC CTCTGAAACG
CTAAAACGTG AAATCCCACT TATGATAGCC GCCACAGTAT TGGCAGGCTT TTTACTCCAT
GATGGTGTTC TCAGTCGCAT CGATGGCTTA ATTTTACTCG GCGCATTCTT CGCCCTCATG
GGTTACTTAA TTTATCAAGC CCTCAGTAAT AAATCCGCCG ATGCCTTTAT CGATGAATCC
GATGCTGAAA TACCCAAAGG CGTACCGACA TTGCGCGCCG TATTCTGGAT AGTGGTTGGC
ATGGTACTCT TACCCTTATC GGCGGATTGG ATGGTCGATG GTGCGGTAGG TATTGCCAAA
ACCTTTGGTT TATCGGATCT TGTTATCGGC TTAACCATTA TCGCCGTCGG CACTAGCCTG
CCTGAGCTAG CCGCTTGTGT GGCCGGCGTC ATGAAAAAAG AGCACGACCT TGCCATAGGC
AACATAGTGG GCTCTAATGT TTTCAATATT TTAGCTGTTA TGGCCCTGCC AGGATTGATT
GCCCCTGGCG AAGTGGATGC CCAGGCCAGC AGCCGAGATT TTTACATGGT ATTAGCCACG
AGCTGCGCGT TAGCCATATT AGTCTTATCC AGTGGCGCTA AAAAACAGCT CACTCGCTGG
CATGGCGTGT TATTGCTGCT GACCTTTATC GCTTACCAGA TCGTTATTTT TAGCTCAAAC
TAG
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| Protein sequence | MLVNILYLVV GLAVLVWSAD RFVYGAAAFA RNLGLPPMLI GLTIVAMGSS APEMFVAATA
SMEGMSDTAI GNVLGSNVAN ITLILGITAL LGALSVTSET LKREIPLMIA ATVLAGFLLH
DGVLSRIDGL ILLGAFFALM GYLIYQALSN KSADAFIDES DAEIPKGVPT LRAVFWIVVG
MVLLPLSADW MVDGAVGIAK TFGLSDLVIG LTIIAVGTSL PELAACVAGV MKKEHDLAIG
NIVGSNVFNI LAVMALPGLI APGEVDAQAS SRDFYMVLAT SCALAILVLS SGAKKQLTRW
HGVLLLLTFI AYQIVIFSSN
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