| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_0492 |
|---|
| Symbol | |
|---|
| ID | 4017782 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella denitrificans OS217 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007954 |
|---|
| Strand | - |
|---|
| Start bp | 563524 |
|---|
| End bp | 564084 |
|---|
| Gene Length | 561 bp |
|---|
| Protein Length | 186 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 637954478 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_561507 |
|---|
| Protein GI | 91791856 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3117] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.0106411 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATCGCG TTACCTTAGC CATTATTGCC TTTTTTAGCG CCTCGCTGTT CTTGTACTGG
CAAGTGCAAG TCAAGCGTAA CGCCATGGAA CAAATTCAAG TTGATGTTAT CGAAAGGCCC
GCATTTATTG CCGATGAGCT ACGAAGCGCC GAGTTCGACA AGCAAGGCTT GTTAGTCAGC
AAAGTCACCG CAACCCACAT GGAACACTAT GAGTCGACTC AGGTGACTCA TTTCACTGAG
CCTGTGTATT TGGTTTATCC TGAGTCGGGT AAGGCCCAAT GGCAGTTACA AGCCAATAAG
GGCAGATTAA ACAAGCAGAC TGGCAAAATG CTTTTAGAGA ACAATGTAAT AATTGATGCT
ATTAACATCG AAGAACCAGT ACAATCAATC TCAACTCAGT CATTGGCATT CGACATGAAT
ACCATGATAA TGACCTCCGA TGACATGCTA TATGTCAAAG GGAAAGACTT TATTATTCAA
GGCTTAGGCC TGTATGCTGA CCTAGAAGCA GAAGAATTGA CCTTACTAAG TCAGGTAGAA
GGAACATATG AAGCAAAGTA A
|
|---|
| Protein sequence | MNRVTLAIIA FFSASLFLYW QVQVKRNAME QIQVDVIERP AFIADELRSA EFDKQGLLVS
KVTATHMEHY ESTQVTHFTE PVYLVYPESG KAQWQLQANK GRLNKQTGKM LLENNVIIDA
INIEEPVQSI STQSLAFDMN TMIMTSDDML YVKGKDFIIQ GLGLYADLEA EELTLLSQVE
GTYEAK
|
|---|
| |