| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_0446 |
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| Symbol | prmA |
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| ID | 4017217 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 516676 |
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| End bp | 517557 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637954432 |
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| Product | ribosomal protein L11 methyltransferase |
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| Protein accession | YP_561461 |
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| Protein GI | 91791810 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG2264] Ribosomal protein L11 methylase |
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| TIGRFAM ID | [TIGR00406] ribosomal protein L11 methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.119875 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTTGGA TCCAACTTAG AATCAACACC AACAGTGACC ATGCTGACGC CATTGGCGAT
ATCCTTATGG AGCAAGGCGC TGTGTCTATT ACCTATGAAG ACGGTAAGGA CACCCCTATT
TTCGAACCTA AATTAGGTGA AACGCCGCTT TGGCAAGACA CTGTGGTGGT GGCGCTATTC
GATGCTGGCA CAGATCTAGC GCCGACCGTA GCCCTATTAG CCACCTCGCC CATGCTAGGG
GAAAACTTCC CCCACAAAAT CGAGCAAATC GAAGACAAAG ATTGGGTCCG TGAATGGATG
GACAGCTTTC ATCCGATCCA ATTCGGTACT CGCTTGTGGA TTTGCCCTAG CTGGCGTGAA
ATTCCCCACC CTGATGCGGT GAATGTAATT TTAGATCCAG GTCTCGCTTT CGGTACTGGT
ACCCACCCCA CTACCGCTTT GTGCCTAGAA TGGCTAGACA GCTTAGATTT AAGCGATGAA
GAGGTGATAG ATTTTGGCTG CGGCTCAGGC ATTCTTGCCA TCGCGGCCTT AAAACTTGGC
GCCAAGAAAG TCACTGGCGT TGATATCGAC TACCAAGCCA TAGATGCCTC ACAAGCCAAT
GCTGTGCGTA ATAATGTCCA AGACCAACTG GCCCTGTATT TACCAGAAGA TCAACCTGAA
GGACTCATAG CCGATGTGCT GGTTGCTAAC ATACTCGCAG GCCCGCTGCG GGAACTTGCG
CCGCTCATCG CAGAAAAAGT CCGTCAAGGC GGCAAGCTTG CACTTTCTGG CCTGTTGCAG
GAGCAAGCTG AAGAGTTAGC CGAATTTTAT AGCCAATGGT TCCAGATGGA CCCACCTGCC
TATAAGGATG ATTGGAGTCG CTTAACAGGC ATACGTAAGT AG
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| Protein sequence | MPWIQLRINT NSDHADAIGD ILMEQGAVSI TYEDGKDTPI FEPKLGETPL WQDTVVVALF
DAGTDLAPTV ALLATSPMLG ENFPHKIEQI EDKDWVREWM DSFHPIQFGT RLWICPSWRE
IPHPDAVNVI LDPGLAFGTG THPTTALCLE WLDSLDLSDE EVIDFGCGSG ILAIAALKLG
AKKVTGVDID YQAIDASQAN AVRNNVQDQL ALYLPEDQPE GLIADVLVAN ILAGPLRELA
PLIAEKVRQG GKLALSGLLQ EQAEELAEFY SQWFQMDPPA YKDDWSRLTG IRK
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