Gene Sden_0389 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_0389 
Symbol 
ID4017523 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand
Start bp457673 
End bp458008 
Gene Length336 bp 
Protein Length111 aa 
Translation table11 
GC content41% 
IMG OID637954374 
Productfrataxin-like protein 
Protein accessionYP_561407 
Protein GI91791756 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1965] Protein implicated in iron transport, frataxin homolog 
TIGRFAM ID[TIGR03421] iron donor protein CyaY 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCATGA CAGATACTGA ATTTCATCAA CTCGTTGATG CTATGTTCAG CCAGATTGAA 
ACCGCAATTG AATACGCCAT CGATGAGCAA GATGCCGATG TAGATATCGA TGCCAGCGGC
AATGTACTGC AGTTAGAGTT TCAAGATAGA TCGCAAATAG TCATCAATAA ACAAGAACCT
TTGCATGAGA TTTGGATTGC GACTCGCTTT GGTGGCTACC ACTTTGCCTT TAAAGAAAAC
CGTTGGTTTG ACGAGCGTAA TCAGCAAGAG TTTATGCCGT TTGTGATTGA TGCTATTCAT
AAACAATCGG GTATTGAGCT TAAGTTAACT GCTTAA
 
Protein sequence
MAMTDTEFHQ LVDAMFSQIE TAIEYAIDEQ DADVDIDASG NVLQLEFQDR SQIVINKQEP 
LHEIWIATRF GGYHFAFKEN RWFDERNQQE FMPFVIDAIH KQSGIELKLT A