| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_0386 |
|---|
| Symbol | |
|---|
| ID | 4017520 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella denitrificans OS217 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007954 |
|---|
| Strand | - |
|---|
| Start bp | 454372 |
|---|
| End bp | 455583 |
|---|
| Gene Length | 1212 bp |
|---|
| Protein Length | 403 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 637954371 |
|---|
| Product | protein of unknown function DUF513, hemX |
|---|
| Protein accession | YP_561404 |
|---|
| Protein GI | 91791753 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG2959] Uncharacterized enzyme of heme biosynthesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.276274 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAACATA CTGATAAAGA AACAAAAAAA GCCGCCCCAG CAGCAGGATC TACAACTCAA
GCGGCACCTG CTGATCCTAA AAGTTCACCC TCGACACATG CAGTGGAAAA AGAAGCCGTT
AACACAATCA ACAAGGCAGA TAAAAAAATG AACAAGGCCG CGACGCCCTC TTCCCAAACG
CCAAGTAAAT GGCCAATGCG CTTGGGTTTA TTATTGTGCT TTATCATTGC CTGTACGGCC
TTGGCAGCAA GCTATTGGCT TTATAGTCAG TCGGTTTTAC TCAAGTCAGA ACTTGCCGCT
AAACAATTGC AGGCCCAGCA AATCACAGGT TCGGTCAACA CTAGCCTAAG TTACGCTAAA
GCTAAGATAG AGTCTCTTGA AAAACAGCAG CAGAATAATG CGAATGCCTA CCAAGAATTA
ACCGCAACCC AGGCCACTAT TGAGCAATTA CAAACTCAAG TGAACGCCTT GGCTCAACGC
AGCCCAAATC ATTGGATGGC TTCTGAAGCT GATTATTTGG TAAGAATGGC TGGTCGAAAA
ATTTGGTTAG AGTCAGATCT TCTCACTGCG GTGCAATTAT TAGAGTCTGC CGATGAACGT
ATTGCTGCAA TGCAAAACCC GGCGTTATTA CCTATACGTA AAGCATTATC TCAAGATATC
GCTCAGCTTA AATCCATTAA ATTGTTAGAC ACTTCGAGCC ATATTCTAGC CTTGGACAAC
CTAATAATAA AACTCGATAA CTTACCCCTT AATGCCAACA AGACCCTTGC ATCCAGCCCA
GTAACAACCG ATGCCAAACT TTCAGATGAT ATCGGCGATT GGCAAGCTAA CCTGAGAAAA
AGCTGGCAAA CCTTTAGCAG CAGCTTAGTC ACCATCAGAA AGCGAACTAC AGATCTTGAA
CCGCTATTAT CGCCTGAGCA GCAATGGTAT TTAACTGAAA ATATCAAAAA TAAACTTTTA
CAGGCGCAAC GAGCACTGCA AGATAAAAAT AACTCTGAAT TTCAGCAATC ATTAGCCATG
GCCAAACAAT GGTTAGGCCA GTACTTCGAC CTACACCAAG CAAGCACTGC AGCAGCCATT
GAAACCATCA ATAAACTCGC TGAAATCAAG CTCACGCCCA TAACACATCA ACAACTAACC
GCAGCACCGC TGTTAGAGCA ATTAGTTACC TTTGGTGATT TATCAGCCCC TGCTGGGGAG
CCAACACTAT GA
|
|---|
| Protein sequence | MEHTDKETKK AAPAAGSTTQ AAPADPKSSP STHAVEKEAV NTINKADKKM NKAATPSSQT
PSKWPMRLGL LLCFIIACTA LAASYWLYSQ SVLLKSELAA KQLQAQQITG SVNTSLSYAK
AKIESLEKQQ QNNANAYQEL TATQATIEQL QTQVNALAQR SPNHWMASEA DYLVRMAGRK
IWLESDLLTA VQLLESADER IAAMQNPALL PIRKALSQDI AQLKSIKLLD TSSHILALDN
LIIKLDNLPL NANKTLASSP VTTDAKLSDD IGDWQANLRK SWQTFSSSLV TIRKRTTDLE
PLLSPEQQWY LTENIKNKLL QAQRALQDKN NSEFQQSLAM AKQWLGQYFD LHQASTAAAI
ETINKLAEIK LTPITHQQLT AAPLLEQLVT FGDLSAPAGE PTL
|
|---|
| |