Gene Sden_0345 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_0345 
Symbol 
ID4017868 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand- 
Start bp385473 
End bp386216 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content49% 
IMG OID637954326 
ProductPepSY-associated TM helix 
Protein accessionYP_561363 
Protein GI91791712 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.965963 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCGTAT CTCACCAAAT TCGCCGAGCC CATAAATGGC TGACCTTATT TTCCGCCATT 
CAATTACTGC TCTGGCTCAG TTCAGGGGTT TATATGGTGG TGATGGATAT CGACTTTATT 
CATGGCGATA GCTTAGTGGT ACAGAAAAAT GAACCCATAA ACACTGAAAC GCTCACCCTA 
ACACTGGATG AGGTGCTGGC CCGCTACCCT GAGGCCAGTC AACTAAGCCT CTTTGCCGTC 
CATGGTGTGA CCTATTATCG GCTCACTGTC GAGGGGAAAA CCTTGCTACT CAACGCCATC 
ACAGGCCAAG TGCCCACTCT ATTAACCCAG ACTCAAGCCA TGGCCTCCGC CCAATCCTAT 
TACTTAGGTG AGGTTCTCCC CACCAGCGCC ACACTTTATC TGGATGAGCC GCCCGCTGAA 
ATCAGCCCAA GGCTATTACC TTTGTGGCAG GTCAACTTCA GCCCGCTTAA TACCAGCCTC 
TATCTCAATG CCAGCACGGG TGCCTTAGTC AGCAAGCGCC ATGATTACTG GCGCTTATTC 
GATATCATGT GGATGTTACA CATCATGGAT TATGACACCC GTAATGATAT CCACAACCCA 
CTGCTTAGCA TAATGGCTTT GCTTGCCTTA CTCACAGCGC TTGCTGGTAT AGCCCTAACC 
TACATCAGCT TTAGAGCAGC CCCTATTAGC GCAGATAACT TGGATGACAA GTTAGTCAGT 
GCTAACAATA AGGAGGGTAA ATAA
 
Protein sequence
MSVSHQIRRA HKWLTLFSAI QLLLWLSSGV YMVVMDIDFI HGDSLVVQKN EPINTETLTL 
TLDEVLARYP EASQLSLFAV HGVTYYRLTV EGKTLLLNAI TGQVPTLLTQ TQAMASAQSY 
YLGEVLPTSA TLYLDEPPAE ISPRLLPLWQ VNFSPLNTSL YLNASTGALV SKRHDYWRLF 
DIMWMLHIMD YDTRNDIHNP LLSIMALLAL LTALAGIALT YISFRAAPIS ADNLDDKLVS 
ANNKEGK