Gene Sden_0321 details

Gene Information

• Locus tag: Sden_0321
• Symbol: folE
• ID: 4020434
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella denitrificans OS217
• Kingdom: Bacteria
• Replicon accession: NC_007954
• Strand: -
• Start bp: 359333
• End bp: 359986
• Gene Length: 654 bp
• Protein Length: 217 aa
• Translation table: 11
• GC content: 47%
• IMG OID: 637954302
• Product: GTP cyclohydrolase I
• Protein accession: YP_561339
• Protein GI: 91791688
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG0302] GTP cyclohydrolase I
• TIGRFAM ID: [TIGR00063] GTP cyclohydrolase I

Plasmid Coverage information

• Num covering plasmid clones: 28
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCATTAA GTGACGCCGC AATCAAAGTA CAAGCTGCAC TGAACGAGCG TGGGCTAGAA 
ACCCCTATGC TGCCAAAAAC TTCAACACCT GAAGAGCGTA AGATTAAGAT TGAGCACCAT 
ATGCGTGAGA TCTTAACCTT GATGTCCTTG GATTTAACCG ATGACAGCCT GATGGATACC 
CCAAGACGCA TCGCTAAGAT GTACGTGGAT GAGATTTTCT CAGGCCTAGA TTATGACAAC 
TTCCCTAAAA TCACTGTCAT AGACAACAAG ATGGGCTTCG ATGAGATGGT CAGGGTGCAA 
GATATTAGCC TCACTAGCAC CTGTGAGCAC CATCTAGTCA CCATAGATGG TTTAGCCACA 
GTGGCGTATT TACCGCGGGC TAAAATCATA GGCCTCTCTA AAATCAACCG CATCGTGCGC 
TTCTTCGCCC AACGCCCGCA GGTACAAGAA AGACTGACAC AGCAGATTTT AGTGGCATTG 
CAAACCTTGC TCGAAACCAA AGATGTGGCA GTAAAAATTG ATGCGGTGCA TTTCTGCGTT 
AAATCTCGCG GCGTGATGGA CTCTACCAGC TCGACTACCA CCACATCCTT AGGCGGGATT 
TTTAAATCCA ACCCAGCCAC CCGCGCCGAA TTTTTACAGC AAGCCAAATT CTAG 

 

Protein sequence

MALSDAAIKV QAALNERGLE TPMLPKTSTP EERKIKIEHH MREILTLMSL DLTDDSLMDT 
PRRIAKMYVD EIFSGLDYDN FPKITVIDNK MGFDEMVRVQ DISLTSTCEH HLVTIDGLAT 
VAYLPRAKII GLSKINRIVR FFAQRPQVQE RLTQQILVAL QTLLETKDVA VKIDAVHFCV 
KSRGVMDSTS STTTTSLGGI FKSNPATRAE FLQQAKF