Gene Sden_0279 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_0279 
Symbol 
ID4020411 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand- 
Start bp314994 
End bp315566 
Gene Length573 bp 
Protein Length190 aa 
Translation table11 
GC content50% 
IMG OID637954261 
Producthypothetical protein 
Protein accessionYP_561298 
Protein GI91791647 
COG category[S] Function unknown 
COG ID[COG2930] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.00138726 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGAAATT TCAAAGTATT AGTGAATACC ACCTTGGCTT TATTCGCGCT AGTCATGGGC 
TCCCAGGCCG CGGCCGAGCC ATACAGCAAT GCCATGGCAA ACTTTAAGCA AGCCGCAGAA 
AGCAAAGCCT TTTTCAATAC GGCTTATGGC TATGCCATCT TCCCTACTGT GGGCAAAGGC 
GGTTTTGGTA TTGGCGCCGC TTATGGTGAA GGCCGTGTGT ATCGTGGTGG CCAGTTCACC 
GGTGAGTCGA CCATGACCCA AGTGTCCATT GGTTTTCAAA TTGGCGGCCA GGCTTATAGT 
GAAATCATTT TCTTCAAAAA TGCCGAAGCT TATAACAACT TCACCAGCGG TAGCTTCGAG 
TTTAGCGCTC AAGCCTCTGC CGTGGCCCTT AATGCTGGCG CAAGCGCTCA AGTCGGCACT 
ACAGGTAACT CTGCGAATGC TGGGCAGTCA GGTGGTAATC AGTCGACTAA GGCATCTTAT 
GTCAATGGCA TGGCGATATT CACCTCTGCC AAAGGTGGGT TAATGTACGA AGCCGCTATC 
GCTGGGCAAT CTTTTAGCTT TAAGCCCAAA TAA
 
Protein sequence
MRNFKVLVNT TLALFALVMG SQAAAEPYSN AMANFKQAAE SKAFFNTAYG YAIFPTVGKG 
GFGIGAAYGE GRVYRGGQFT GESTMTQVSI GFQIGGQAYS EIIFFKNAEA YNNFTSGSFE 
FSAQASAVAL NAGASAQVGT TGNSANAGQS GGNQSTKASY VNGMAIFTSA KGGLMYEAAI 
AGQSFSFKPK