| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_0275 |
|---|
| Symbol | |
|---|
| ID | 4020407 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella denitrificans OS217 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007954 |
|---|
| Strand | + |
|---|
| Start bp | 313011 |
|---|
| End bp | 313502 |
|---|
| Gene Length | 492 bp |
|---|
| Protein Length | 163 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 637954257 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_561294 |
|---|
| Protein GI | 91791643 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.000890841 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGATTAAAA ACGTTATTGA TAAATTAGTG TTTGGCATAG CCTTAATTTT TGCGCTGCAA
TTGCCGCTGC TGGCGGATCA TTATCAACAA TATCTGTCTG GTCAGTATCA GGCCACTAAG
TGGCAAGTCG ATGGCTATGA GATGACCGCT AAAATGCATC AATTCCCCAA TGCTAGAGCC
ATGATAGCGC GCCATCTTCA GCTCGATGAA CCTAGCGTTA AAACAGATGC CAAGCAGAAA
CTGGCCACCC TCGAGTTATT CGACGAGTTA AGCTTAGGCA TGGATATATT CAACCGTGGC
AACCTATTTG AGCAGTTGGT CTTTATGTTC AATCCCAAAA GGGTTGATGC ACTCATTGAG
ACCAGTAAAA ACTTTACCTT GGGTATCCCA CTTGATCCCG CAGGGTTAAG CTTTGGACTT
GTTTTGGGCC TGCTACTTAA CCTGCTCATC ATGTTGCCTG CGACACTGTT GTTTAGCAAA
AGAAAAGCTT AG
|
|---|
| Protein sequence | MIKNVIDKLV FGIALIFALQ LPLLADHYQQ YLSGQYQATK WQVDGYEMTA KMHQFPNARA
MIARHLQLDE PSVKTDAKQK LATLELFDEL SLGMDIFNRG NLFEQLVFMF NPKRVDALIE
TSKNFTLGIP LDPAGLSFGL VLGLLLNLLI MLPATLLFSK RKA
|
|---|
| |