Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_0270 |
Symbol | |
ID | 4020401 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | - |
Start bp | 307665 |
End bp | 308240 |
Gene Length | 576 bp |
Protein Length | 191 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637954252 |
Product | transport-associated |
Protein accession | YP_561289 |
Protein GI | 91791638 |
COG category | [R] General function prediction only |
COG ID | [COG2823] Predicted periplasmic or secreted lipoprotein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00000691335 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATATG CACTAATACT GCTCACCTTA GCCCTGTTAC AAGGTTGCGC TGGTGCAGTC GTGCTGGGCG CCGTTAGCGG CGCTAAAATG GCCAACGACG AGCGCAGTGT TGGTACTCAG CTCAGCGACA CCAATGCGGA TTTTCAAATT TCCAGCGCCC TGTCTAAACA CAATGATATT AGCAATCAAA CTAATATCAC CGCTGTGGTG ATGAATAACA ATGTGCTTAT GATAGGTCAA TCGCCTAATT CCATGTTGCG GGATAAAGCG ATTAATGCAG TGCAAGGTTT GCAACTTGGC GGCAAGATCC ATAATCAAAT TCGCATCGGC AACCCGACCT CTTTCACTAC CCGCAGTAAC GATACTTGGG TAACCACTAA AGTGAAGGGG CGCATGCTCA ATGAAAATGG CATAGATGTG ACCCGCATAA AAGTCATCAC CGAAAACGGT GAAGTGTTTC TACTTGGATT AGTGGATCGC AAACAAGCCG ATTTAGCCGT GGACATCGCA CGAAATACCG CAGGTGTGCG CAAAGTGGTT AAAGTGTTTG AATATGTAGA CGTATCTAAG GACTAA
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Protein sequence | MKYALILLTL ALLQGCAGAV VLGAVSGAKM ANDERSVGTQ LSDTNADFQI SSALSKHNDI SNQTNITAVV MNNNVLMIGQ SPNSMLRDKA INAVQGLQLG GKIHNQIRIG NPTSFTTRSN DTWVTTKVKG RMLNENGIDV TRIKVITENG EVFLLGLVDR KQADLAVDIA RNTAGVRKVV KVFEYVDVSK D
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