| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_0256 |
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| Symbol | |
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| ID | 4020367 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 294990 |
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| End bp | 296069 |
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| Gene Length | 1080 bp |
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| Protein Length | 359 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637954238 |
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| Product | type IV pilus assembly protein PilM |
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| Protein accession | YP_561275 |
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| Protein GI | 91791624 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4972] Tfp pilus assembly protein, ATPase PilM |
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| TIGRFAM ID | [TIGR01175] type IV pilus assembly protein PilM |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTTTCAA AATTTTGGCG TCCTCAGGCA CCGCAAATGA TAGGGGTAGA TATTGGTTCT
TATGAAATCA AAGCTATCCT ATTGGGCAAA ACTGCTGACG GTTATAAAAT TCAAGCTCAC
AGCTGCGTAC CGATAAAAAA AGGTGCGGTA GTTGATCATG ATATTCGCGA TTCCGCAGCC
GTGATTGAGG CGCTAAAGCA AGTCAAACGT GGCTTACCTA AATCGGCAAA ATTTGCCGCT
GTTTCTGTTT CTGGTTCCGC TGTGATGACC AAGGTTATTT ACATGGACTC TTCACTCACC
GAAGAGGAAA TGGAAGCTCA AATTGAAATT GAAGCCGATA ACTTAATTCC TTATTCCCTC
GATGAAGTTA GCATAGATTT CGAAACCTTA AAAACCAATA AAACCGATCC CACTAAAGTG
GACGTGCTAT TGAGTGCTTG TCGAACTGAG AATATTGATT CTAGAGTCGA TGCCCTCGAT
GCCATAGATA TAGATGCAAA AGTGGTCGAT GTAGAAGGTT ATGCTTTGGG GCGTTCTGCC
GAACTAATCA TGGCTCAGTT ACCCCCTGGC GCGGAAGAAA AGTCTGTCGC CTTAGTCGAT
ATTGGTGCCA ATATGACTAC CTTTGCTGTG GTTGAACGAG GTGAAACCAT ATTCACTCGA
GAGCAAGCCT TTGGTGGTGA ACTGTTTACT CAGGCCATTT TGTCTACCTA TGGTATGTCT
TACGATGAAG CTGAAAACGC TAAAATTAAA GGCGAATTAC CAAGGAACTA TACCTTCGAA
GTGTTATCTC CTTTTCAAAC TCAATTATTG CAGCAAGTAA AACGTACCTT GCAAATTTAT
GCGACCGCCA GCGGTAAAGA AAAAGTAGAT TATATAGTGC TGTGTGGCGG CACGGCCAAA
TTAGAGGGTA TGGAAGCATT ACTTTTGAAT GAATTGGGCA TCAACACTGT GGTTGCTAAT
CCATTTTTAG GTTGTTTGCA TGGGGATGAA CTCATTAAGT CTCAATTACA GCCAAATGTG
AATAAATACA TGGTTGCCTG TGGTTTGGCG CTAAGGAGTT ATGCTCAATG GCGAATATAA
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| Protein sequence | MLSKFWRPQA PQMIGVDIGS YEIKAILLGK TADGYKIQAH SCVPIKKGAV VDHDIRDSAA
VIEALKQVKR GLPKSAKFAA VSVSGSAVMT KVIYMDSSLT EEEMEAQIEI EADNLIPYSL
DEVSIDFETL KTNKTDPTKV DVLLSACRTE NIDSRVDALD AIDIDAKVVD VEGYALGRSA
ELIMAQLPPG AEEKSVALVD IGANMTTFAV VERGETIFTR EQAFGGELFT QAILSTYGMS
YDEAENAKIK GELPRNYTFE VLSPFQTQLL QQVKRTLQIY ATASGKEKVD YIVLCGGTAK
LEGMEALLLN ELGINTVVAN PFLGCLHGDE LIKSQLQPNV NKYMVACGLA LRSYAQWRI
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