Gene Sden_0189 details

Gene Information

• Locus tag: Sden_0189
• Symbol: rplO
• ID: 4017909
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella denitrificans OS217
• Kingdom: Bacteria
• Replicon accession: NC_007954
• Strand: +
• Start bp: 205028
• End bp: 205462
• Gene Length: 435 bp
• Protein Length: 144 aa
• Translation table: 11
• GC content: 49%
• IMG OID: 637954165
• Product: 50S ribosomal protein L15
• Protein accession: YP_561209
• Protein GI: 91791558
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0200] Ribosomal protein L15
• TIGRFAM ID: [TIGR01071] ribosomal protein L15, bacterial/organelle

Plasmid Coverage information

• Num covering plasmid clones: 3
• Plasmid unclonability p-value: 0.00000000620711
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGTCTAA ATACTCTATC TCCAGCAGCA GGTTCTAAAT CTGCTCCTAA GCGTGTAGGC 
CGTGGTATTG GTTCAGGTTT AGGTAAGACA GCGGGTCGTG GCCATAAAGG TCAGAAGTCT 
CGCAGCGGCG GCGGCGTTCG CGTCGGTTTC GAAGGTGGTC AAATGCCACT TAAGATCCGT 
CTACCTAAGT TTGGCTTTAC CTCGCGTCGT GCTTTGGTAA CTGCTGAAGT TCGTTTACTC 
GAACTAGCAA AAGTTAACGG TGATGTTATC GACTTAAACA CGCTGAAAGA TGCGAACGTT 
CTTACTCGCA ACATCCAGTT TGCGAAAATC GTTCTTTCAG GTACCATTGA GCGCCCTGTG 
ACTGTAAAAG GTCTGAAGGT AACCAAAGGT GCACGTGCAG CTATTGAAGC TGCCGGCGGT 
AAGATCGAGG AATAA 

 

Protein sequence

MRLNTLSPAA GSKSAPKRVG RGIGSGLGKT AGRGHKGQKS RSGGGVRVGF EGGQMPLKIR 
LPKFGFTSRR ALVTAEVRLL ELAKVNGDVI DLNTLKDANV LTRNIQFAKI VLSGTIERPV 
TVKGLKVTKG ARAAIEAAGG KIEE