| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_0133 |
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| Symbol | |
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| ID | 4020380 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 146783 |
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| End bp | 148345 |
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| Gene Length | 1563 bp |
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| Protein Length | 520 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637954106 |
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| Product | hypothetical protein |
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| Protein accession | YP_561153 |
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| Protein GI | 91791502 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3209] Rhs family protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.800968 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATGTA AAGGAGTACA GCTAGTGGAT ACATTGATTC GTTTTGGCTT ACGGCTTAAG
TTGATCTTGA GTAAGGCAAC CCATGCAAAA ACTACAGCTG TGCTGGATTG GAATAAGCAT
TTCCTAGCGT TCGCGGTCGA GGGGACAAGG GTCATGAATC CGACTCCAAA AATGGGCTTC
ACTCAAAACC CTAGAACAAT AAAAAGCGTA TTTGGAGCTA ATGCTCATGC TTTCAAGCAA
GGATGTGAAA AAGTTGCTAT GACACTCATC GCACGGAGTC AGTTTATAAT TCGTTTAGTC
GCCACATTAC TGTTAGTTGT TGGGCTTACG AGTATGCCAG CTCAAGCGGC GCAAGGAAGT
ACTGTATTTA TCCCCATTGC GGTGGGGGAT ATCACCACCT TTATCCCGAT CATGCCTACC
GCAAGTACTG CCCAGATATC AACAACAGGC GGCAGTCACA ACTTAAGCTG GTCTGCTGTT
AGCAATGCCA GTTACTACCA AATTATCATT ACTGATGAGC ATGGCCTGCA GCGCATTTTT
CAGACCACAG ATACCGACTA TGTGCTGGCA GGCTTACCAT TGGGTAATAA CAAGGTTGAA
GTACAGGCCT GTAATGCTTA TAACCAATGT GGCATAAGAT ACCTAGCTGG CACGGTAACG
ATCACGACTA GGGTCATTTA TCAGCACACA GATATTTTAG GTTCTGTAGT GGCCGAATCT
GATGAGGCGG GTAATATCAT CAGTCGCAGT CATTATGAAC CTTTCGGTAA GCGCCTTGGG
GGCGACAAAG CAGGTATCGG CTATACTGGG CATTTGCAGG ATAAAGACTT AGGTCTTACC
TATATGCAGG CACGATACTA TGATCCACTT ATCGGGCGAT TTTACTCTAA TGACCCCATC
TCATATAGAG GAGTACATAG CTTTAATCGT TATGCATATG CAAATAATAA CCCATATAAA
TATATCGATC CTACAGGAAA CAACGAAGAA TATGTTGCAG GTATTTCAGT AGGGATAGGT
TTCAATGCTG AAGATGTTAA TTTAATTGCG ACATTTGAGA ATTCTGTTTA TAACTATAAT
TTTTTAGAAG GAGTCAGTTT AGGTCAACGT ATCGTCGAAG AGCAAATGTT CCAGCAGTTG
CAATTAGGTG AACTTAGCTC ATTAAGTATG CTTTTAGGTA TTGCGAGATC CAACGGAAAA
TTTGGAGTTG TAAAGGGAGG GTATCACGCT ACTCATCCCG AGGCTGCCGA AGCTATTTTA
CAAGGTGGTT TCAGGAAAGG GACTAAGCCC GGCCGATTAG GCTCTGGCGG AACATATGTA
AATAACACGC CAGAGGGTGC AATTGCTGAG TTTGCTCATC ATAACCCTGG AGTTACACCA
AAAGTCTTAA AGGTTAATTA CAATCCTGGC ACTAATGCGA ACGCGGTTGT AGCTCCGCAG
AATTACGTAG ATCAACTCCC TCTGAATGTG AACAGTATTT CTGCTCCTTC AGTAAGAGCA
CCAGGAACAA TAAATACGAA TGTTCTTAAT GGTTCAGCTA GAGCGACAGA GATATTGCCA
TGA
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| Protein sequence | MKCKGVQLVD TLIRFGLRLK LILSKATHAK TTAVLDWNKH FLAFAVEGTR VMNPTPKMGF
TQNPRTIKSV FGANAHAFKQ GCEKVAMTLI ARSQFIIRLV ATLLLVVGLT SMPAQAAQGS
TVFIPIAVGD ITTFIPIMPT ASTAQISTTG GSHNLSWSAV SNASYYQIII TDEHGLQRIF
QTTDTDYVLA GLPLGNNKVE VQACNAYNQC GIRYLAGTVT ITTRVIYQHT DILGSVVAES
DEAGNIISRS HYEPFGKRLG GDKAGIGYTG HLQDKDLGLT YMQARYYDPL IGRFYSNDPI
SYRGVHSFNR YAYANNNPYK YIDPTGNNEE YVAGISVGIG FNAEDVNLIA TFENSVYNYN
FLEGVSLGQR IVEEQMFQQL QLGELSSLSM LLGIARSNGK FGVVKGGYHA THPEAAEAIL
QGGFRKGTKP GRLGSGGTYV NNTPEGAIAE FAHHNPGVTP KVLKVNYNPG TNANAVVAPQ
NYVDQLPLNV NSISAPSVRA PGTINTNVLN GSARATEILP
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