Gene Sdel_2024 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSdel_2024 
Symbol 
ID8593578 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSulfurospirillum deleyianum DSM 6946 
KingdomBacteria 
Replicon accessionNC_013512 
Strand
Start bp2038047 
End bp2039366 
Gene Length1320 bp 
Protein Length439 aa 
Translation table11 
GC content45% 
IMG OID 
Product2-hydroxyglutaryl-CoA dehydratase D-component 
Protein accessionYP_003305073 
Protein GI268680642 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGCATAG AAGCACATAA AGATTTACTT TCGAGTATTG GTGTGGACGT AGAGCGTCAC 
GCAAAGATGA TGGGTATGGG TCTAGAAGCC TATAAGGCGC AGTTTTTAGG GCAACCTAAT
CGACCCAAAG CGATGGAGTA TTTTGACTGG TTTATGAGTG AGATTCAAGG GCAGAGAATC
GCTGAAATCA ATCAACTTCG TGCGGAGAAA AAACCCGCTG TTGGAACGTT TTGTATCTTT
GTACCTGAAG AGATTGTTGT GGGTGCTGGT GGGGCGTGTT ATGGCTTATG CGGTGGCTCT
AATGCGACCA TTGCGGACGC TGAGACGGAA CTGCCTCGTA ACATTTGCCC GCTTATCAAA
TCCGCACACG GTTTTAAACT TCAACGCACC TGTGCTTACA CCCAATCAAG TGACTTTATC
TACGGTGAAA CCACCTGTGA AGCGAAGAAA AAAGCGTGGG AAATCCTTGC CAAACACCAT
CCCGTGCATG TGATGAACAT TCCACATATG AAGCGTGAGA AAGACCTTAA AATGTGGCAA
GAAGAGATAG AAGAGTTTAA AGAGCATATT GAAGGGGTGA TTGAGCAACC TTTAAGCCTT
GAAGCGATGA AAGAGGGTGT GCGCAAAGTC AATGCTAAAC GCTCCGCTCT TCAAAGATTG
GACAAACTTC GTAGCTCAAA CCCCGATATT ATGCCGATTA GCGGGAAAGA TTGTTTGTGG
ATTACGCAAG TGGGTTTTAT GGACGACATC GAACGCTACA CTGCAAAAAT CAATGAACTC
TGCGATGAGT TAGAAGAGCG TGTCAAAGAG GGTGTGAGTG TTTTTCCAAA AGATACGCCT
CGTTTGATGG TTTTAGGCAC GCCGTTTGCG CCACCAAACT GGAAACTTCA CACGGCGGTG
GAAAACACAG GAGGCTGTGT CATCAATGAA GAGAGCTGTA TCGGACATCG TTACTTTAAA
GACAATGTGG ACATTGAGGG TGTGCAAAAT GATGACGAAC TTTATGCGCG TTTGATGGAG
CGTTACTCGA AGATTGATTG TGCGTGTTTT ACACCTAATA CAGGACGTAT TGATAAAATC
GTACAGATGT ACAAAGAAAG ACAAGCCGAT GGTGTCATCT ACTACACGCT CTCTTTTTGT
CACACGTATA ATGTTGAATC CCACCTTGTT ACCGAGGCGA TGGCAAAAGA GGGAATTCCC
TGTCTAGTCA TTGAATCAGA CTATTCACCT GAGGATGCAG GGCAGATTAA AACCCGTGTC
GAGGCGTTTT TAGAGAGCAT TAGCTTTAAG AAAAAAGCCC AAGCGTTTGC GAATAAATAA
 
Protein sequence
MGIEAHKDLL SSIGVDVERH AKMMGMGLEA YKAQFLGQPN RPKAMEYFDW FMSEIQGQRI 
AEINQLRAEK KPAVGTFCIF VPEEIVVGAG GACYGLCGGS NATIADAETE LPRNICPLIK
SAHGFKLQRT CAYTQSSDFI YGETTCEAKK KAWEILAKHH PVHVMNIPHM KREKDLKMWQ
EEIEEFKEHI EGVIEQPLSL EAMKEGVRKV NAKRSALQRL DKLRSSNPDI MPISGKDCLW
ITQVGFMDDI ERYTAKINEL CDELEERVKE GVSVFPKDTP RLMVLGTPFA PPNWKLHTAV
ENTGGCVINE ESCIGHRYFK DNVDIEGVQN DDELYARLME RYSKIDCACF TPNTGRIDKI
VQMYKERQAD GVIYYTLSFC HTYNVESHLV TEAMAKEGIP CLVIESDYSP EDAGQIKTRV
EAFLESISFK KKAQAFANK