Gene Sdel_2003 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSdel_2003 
Symbol 
ID8593557 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSulfurospirillum deleyianum DSM 6946 
KingdomBacteria 
Replicon accessionNC_013512 
Strand+ 
Start bp2018395 
End bp2019018 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content37% 
IMG OID 
ProductLytic transglycosylase catalytic 
Protein accessionYP_003305052 
Protein GI268680621 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.323498 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTACTTC GTCTTTTTAT GTTACTTTGT TTACCTTTGT TCATGTGGGC AGCCCCCAAG 
CATTATGGGG AAAATATTTG GGTAAAAGTA GGACAAATTT ACGGTATTGA ACCGAGTCTT 
TTGTATTCGA TTGCAAAAGT TGAGAGTGAT TTAGACCGTT ACGTAGTGGC TTTTAGTGCC 
AATAAAATGA CGCAAAAACA AGCGAGAGAG TTAGAACAAT TTTTAAAACA AAAAGGCATT 
GAGAGCAAAC GACACACCCA AGTCATTGCG ATTAAAAGTA AAAACAGATA CGAAGCCAGT 
CACGTCGTAC ATTTTCTCTA CACCCGTAAC TATCCTCGTT TTGATATGGG CATTATGCAA 
ATCAACTCCA TTCACAAACC CATGCTCGAT AGAGCCAACA TCTCTTTATA TGACCTTTTT 
GACCCCAAAG TAAATATTCA AGTGGGTGCG TACATTTTGG CGACTTGTTT TGCTAAACAT 
AAAAATAACA AAGATGCCAT CAATGCTTAC AATGGCAAAA TCAAAGATAA TCCCTACTCT 
GCGAAGGTCT TTAAGGAGTT TAAAAAACTT TACAGCTCTT ATCAAAAAGA TAGAAACAAA 
CTCGCTTACA AAGACCCATC ATAA
 
Protein sequence
MVLRLFMLLC LPLFMWAAPK HYGENIWVKV GQIYGIEPSL LYSIAKVESD LDRYVVAFSA 
NKMTQKQARE LEQFLKQKGI ESKRHTQVIA IKSKNRYEAS HVVHFLYTRN YPRFDMGIMQ 
INSIHKPMLD RANISLYDLF DPKVNIQVGA YILATCFAKH KNNKDAINAY NGKIKDNPYS 
AKVFKEFKKL YSSYQKDRNK LAYKDPS