Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sdel_1978 |
Symbol | |
ID | 8593531 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sulfurospirillum deleyianum DSM 6946 |
Kingdom | Bacteria |
Replicon accession | NC_013512 |
Strand | + |
Start bp | 1994163 |
End bp | 1995821 |
Gene Length | 1659 bp |
Protein Length | 552 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | |
Product | DNA primase |
Protein accession | YP_003305028 |
Protein GI | 268680597 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATAGATA AAACATCCAT AGAAAACCTC AAACAACGTC TTGATATTGT CGAAGTGATT GGCTCTTATT TGGAGTTGAA AAAAAATGGT GCAAACTACA AATGCGTCTG CCCTTTTCAC AACGACACTA GCCCAAGCCT TGTGGTGAGT CCCTCCAAAC AAATCTATCA CTGTTTTGCC TGTGGCGCAG GGGGAGATAG CATCAAATTT GTCATGGAAT ATGAAAAATT AAGCTACCCC GAAAGCATTG AAAAACTCGC CAACATGGTC AATTTTTCCC TCACATATAC CACGCAAAAT GGCGCGCAAA AAGAGAATCG AAAATTGATG GAAAATCTCA ATGCATTTTA CGTGAAAGAA CTCGATAAGC ACTTAAGCGC AAAAAATTAT TTATCGCAAC GAGGTATCTC TGAAGCGATG ATTGAAAAGT TTGAAATAGG CTACGCTCCT TCCTCTTTTT CAACCCTGGA TTTTTTAAGT AAACACGCCT ATACGATGAG TGAAGCGATA GAGTATGGTG TGGCGGGAAT CGGTGAAAAC AACCAACCCT ACGCACGTTT TATTGAACGG GTGACGTTTC CTATCTATGC TCCAAGCAAT AAACTGGTGG GATTTGGAGG ACGCACCCTC TCTAACCATC CTGCCAAATA TGTCAACTCA CCCCAAACCA AACATTTCAA CAAATCGCAG TTGCTTTATG GATACCCATT GGCGAAAGAG ACGATTTTTA AACGCAAAGC ACTGATTATC ACAGAGGGGT ATTTGGATGT TATTATGCTC CATCAAGCAG GGTTTACCCA CGCCGTAGCC ACCCTAGGAA CGGCTTTGAC ACACGAACAT CTTCCACTTA TCTCCAGAGG CGATCCTGAA GTGATTGTGG CATATGATGG CGATGAAGCG GGCATTAACG CCGCTTTAAA AGCTTCTATG CTTTTAAGCC AACACGCTCT ACGAGGCGGT GTGGTACTCT TTTCTCAAGG AATGGATCCT GCGGATATGG TTCAAAAAGG ACTGCTTGAC GCACTCAATC ATCTTTTTCG CAAACCACAA CCCTTTGTTG AATTTGCCCT AGAGCGCATG GTTAAAAAAC ACAACCTTAA AGACCCTCTC TCCAAACAAA ACGCCCTTGA AGAGGCGATG GCATACCTCA AAACCTTGCC TCAAGCCGTA CAAGAGAGTT ATACAGGATT GCTCTCTGAA CGCTTAGGTT TGCACCATAA TTTGGTCAAA ATTCAAACCC ATAAACCCAA ACGCTTAGAA AAAAAAGAGC GTGTCTTTGA AGATATGTTA GAGCTCACTA TTATCAAAAC TATTTTAAGC GAACCCTCGC TCATAGATAC CGTTTTAGAT ACGATTGATA GTAGCATGTT TAAAACCCAC CAAGAGGAGT TTATGCTCCT GCTTGAAAAT CAGCGTGAAC ACCCAAAGCT AAGACGTATT GAGCTGTGGG AAGATATTAA GATTTACGAT GAAAAAGAGC TGATTGCTTC GATGATCTCT TTTTTATATC ACTATTACAG CGAAAAATTT CAAGAAATCC GATCCGCTCG TGAACTCAGT TATGAAAAAA AACAGTTTTT GATTCGAAAA ATTCAAGAAA AAATGATGAA ATTAAAACAA GGTGAACTCG TCCCATATGA AAGCATTAGT ACTCTTTAG
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Protein sequence | MIDKTSIENL KQRLDIVEVI GSYLELKKNG ANYKCVCPFH NDTSPSLVVS PSKQIYHCFA CGAGGDSIKF VMEYEKLSYP ESIEKLANMV NFSLTYTTQN GAQKENRKLM ENLNAFYVKE LDKHLSAKNY LSQRGISEAM IEKFEIGYAP SSFSTLDFLS KHAYTMSEAI EYGVAGIGEN NQPYARFIER VTFPIYAPSN KLVGFGGRTL SNHPAKYVNS PQTKHFNKSQ LLYGYPLAKE TIFKRKALII TEGYLDVIML HQAGFTHAVA TLGTALTHEH LPLISRGDPE VIVAYDGDEA GINAALKASM LLSQHALRGG VVLFSQGMDP ADMVQKGLLD ALNHLFRKPQ PFVEFALERM VKKHNLKDPL SKQNALEEAM AYLKTLPQAV QESYTGLLSE RLGLHHNLVK IQTHKPKRLE KKERVFEDML ELTIIKTILS EPSLIDTVLD TIDSSMFKTH QEEFMLLLEN QREHPKLRRI ELWEDIKIYD EKELIASMIS FLYHYYSEKF QEIRSARELS YEKKQFLIRK IQEKMMKLKQ GELVPYESIS TL
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