Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sdel_1224 |
Symbol | |
ID | 8592763 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sulfurospirillum deleyianum DSM 6946 |
Kingdom | Bacteria |
Replicon accession | NC_013512 |
Strand | - |
Start bp | 1237780 |
End bp | 1240506 |
Gene Length | 2727 bp |
Protein Length | 908 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | |
Product | TonB-dependent receptor |
Protein accession | YP_003304282 |
Protein GI | 268679851 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.735079 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGTATTA AGTATTCAAA AATAGCGCTG TGTTTGGCGT TATATTCAAG TGTGTATGCA CAGAGTTTTA GTGTAAATTC GCAAAGTTTA GAAGAGGCGA TTCAAAGTAT CGCAACACAA GCGAAGATGC CTTATATGGC TGATGGAAAG TTACTTAAAG GTAAAAAAGC ACCTACCTTT TCCAATGTTG AGACACTCAA AGAAGCTTTA CGTAAGGTTT TAGAAGGCAG TGGTTTAGAA GCTGTGATTG AGAATGAAAC AATTATGATT CAGCCAAAAG CACAGGTGGT TTCAACTCAA ACTAACGATA GCGATGCGGT ACTTTTAAAG CCCATTAGTA TCTCCTCCAC ACCACAAAGT ACGGTGGCAA CAACGGTGAT TGATAGTACG TACATTCAAA GCGCACCCAC AGCCAATCAT ACCATTACGG ATTTATTTAG AGGAAAATCG TATGTACAAT TTGATCAAAG CTCTCTTAGT TCTGCCACAG GAGGCGAGAT AACACCACCT AAGGTTTCCA TTTTTGGAAG TAAGCATTAT GAAAATAATT TTATGCTCAA TGGTGTGAGC AATAACAATG ACTTAAATCC AGGGGGTTCA GAGCTTGGAA CTTCTGATCT GACTGGGCAA CCTAGCGGTG AAGCGCAGTC TTTATTTATT GACACCTCTT TGGTAGAGAG TGTGACCATG CATACGGAAA ATGTCTCCTC TGAATATGGC GATTTTTTAG GGGGAGTGGT GAATGCAAAG CTTAAAGATG CGGCAAAAGA TGGCTGGCAT GGCTCACTCA GTGCTCGTTA TACTGAGGAT TCATGGGCAA GATTTCACTT AACTGAGGAT GAGCGAGAAG AGGCTGAAAC TACCACAACA GCAAAGCTCC AACCTGAATT TAAGAAGAAA GATTACTCTC TTTCCTTACA TGGACCTATC AGTGAGCATT GGGGGTTGAT GGTAAGCTAC GCTAAAAAGG AGTCGGAGAT TCCTTTGGTG ACCAAGTATG TAGTCCCCGA TGGTAATGGG GGTTGGACAC GGGATAAACT AAACCAATAC AGAGAGAGTG AAAACTTTTT AATCAAGCTC AATACCCAAG ATTATGATAA TTTTAAAGCC AGTTTGACGG CCATTTACGC ACCCTATACC CAGTCTAAAT TTAATCCAAA TTTTAAAGAT TCAAACTATG ACATTAAAGG GGGTGGTTAT ACACTCATTT ACGAGATGGA AAATGATTTA AGTTTTGGTA AGTGGAAAAA TACACTCAGT TATCAAATGA ATGAAGTCTC AAGGGATTCG AGCAGTAACA TCAATTACGG TTGGAGAAAT ACGCTTGCAG GAGCCAATTT AGATTGGAAA AACAGTACAA CATCGACCAC CTCTTCTGAG GGTGGTTTTG ATGATTATGA GCAAAAAAAG CAAATCTATG CATGGAAAAG TGTTTTAGAT GTTGAGCCTT TTAAAACCTC TGAGCTAGAA CATGCCATAA AAGTAGGGTA TGAAGCGAAG TATTCCCTTG TGAGTGCCGA GCGAGAAGGC TACACTGCTT ATGCGGTTGT CAATGCAAAA GCCGATACCA GTGTGGTGGG GAGTAAGGAA GATGGTATTT TAACAGGAAG TCAATACTTC ACTCGAAAAG TGATAGGTAT GGCGCAAGAG CGAGAGGTCG ATTATGCTTC GTATGCCGCC TTTTTAGAAG ATAGCATTAA AATTGAGCGT TTTACCATCC GACCAGGCAT TAGGGTTTCT ACAGAGAGCA TTACCCATAA CATTGACCCT GCGTGGAGAC TTTTTGTCAA TGCCGATGTT TTTCACGATA ACGTCTTAAA TATCTATGGT GGAAGCAACC GCTATTATGG TGGACAAATT CTCTCCTATG CAACTCATAT GCCACTTCAA CCCTATGTTT TCACACGAAC GAGTGCGACC GCCGCATGGG TTGCTGGTAC AACAAGCAAC GCCGTGTCGT ATGGTTTGGG TGATTTGAAA ACGCCTTATT CGGATGAGTA CAATGTAGGA ACCTCGCTCA ATGTTTACGA TACCCTCTTT AGCGTGGATT ATGTCAATCG CTCTTATAAA GACCAAATTC GTTCTAAAAC CATTAGTACA GGGCCGACGT ACCGCGAGTA TACCAATGAA GGTGAGAGCA GTTATTGGGG TGTGACGTTT GCTATCTCTA AAGAGTATGA TTTAGGTTCT TTGGGAAAAC ACGCCTCTAA ATTTTCCGCC ACACGCTCGT TTTCAAAGTC TAATAGCTTT GATCCACTGA GTGCCTTTAC GGACAATGAA GAGAAAAGTT ATTCCAATAC CCATATTACC TATAATGGAC GTTTGACGCC AGTAGAAGAT GCACCTGCTA CTGATTTTAA TCGTCCATGG GTCATTGCGT ACACGCATGT GGCAGAACCG TATGATTGGC TCAACCTCAC AGGCGTTTTA CGTTATCAAA CCGCTTCTAA AGGGATGCTA ACGGATGGTT CTGGTTTGGT TGATCCTAAG GGTGTTTTAA CCAACGCCTA TGTCGATGTG GACTATAAGC CAACCTTCAA TGTGGATTTA TCGACTGCTA TCACCACAAA AATCAATGGT CAAAAGTTTA TTTTTGGGGT GGATATTTTA AACCTTTTCA ACCGTAAAAA CGATGCAACC ACAGGTTATG GAAGCAGTAG CAGTGTCTCA ACGGTGACCT ATACGATGGG TCGTCAATTT TACGCCAATG TCAGGTATGA ATTTTAA
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Protein sequence | MGIKYSKIAL CLALYSSVYA QSFSVNSQSL EEAIQSIATQ AKMPYMADGK LLKGKKAPTF SNVETLKEAL RKVLEGSGLE AVIENETIMI QPKAQVVSTQ TNDSDAVLLK PISISSTPQS TVATTVIDST YIQSAPTANH TITDLFRGKS YVQFDQSSLS SATGGEITPP KVSIFGSKHY ENNFMLNGVS NNNDLNPGGS ELGTSDLTGQ PSGEAQSLFI DTSLVESVTM HTENVSSEYG DFLGGVVNAK LKDAAKDGWH GSLSARYTED SWARFHLTED EREEAETTTT AKLQPEFKKK DYSLSLHGPI SEHWGLMVSY AKKESEIPLV TKYVVPDGNG GWTRDKLNQY RESENFLIKL NTQDYDNFKA SLTAIYAPYT QSKFNPNFKD SNYDIKGGGY TLIYEMENDL SFGKWKNTLS YQMNEVSRDS SSNINYGWRN TLAGANLDWK NSTTSTTSSE GGFDDYEQKK QIYAWKSVLD VEPFKTSELE HAIKVGYEAK YSLVSAEREG YTAYAVVNAK ADTSVVGSKE DGILTGSQYF TRKVIGMAQE REVDYASYAA FLEDSIKIER FTIRPGIRVS TESITHNIDP AWRLFVNADV FHDNVLNIYG GSNRYYGGQI LSYATHMPLQ PYVFTRTSAT AAWVAGTTSN AVSYGLGDLK TPYSDEYNVG TSLNVYDTLF SVDYVNRSYK DQIRSKTIST GPTYREYTNE GESSYWGVTF AISKEYDLGS LGKHASKFSA TRSFSKSNSF DPLSAFTDNE EKSYSNTHIT YNGRLTPVED APATDFNRPW VIAYTHVAEP YDWLNLTGVL RYQTASKGML TDGSGLVDPK GVLTNAYVDV DYKPTFNVDL STAITTKING QKFIFGVDIL NLFNRKNDAT TGYGSSSSVS TVTYTMGRQF YANVRYEF
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