Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sdel_1186 |
Symbol | |
ID | 8592725 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sulfurospirillum deleyianum DSM 6946 |
Kingdom | Bacteria |
Replicon accession | NC_013512 |
Strand | + |
Start bp | 1201999 |
End bp | 1204122 |
Gene Length | 2124 bp |
Protein Length | 707 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | |
Product | carbon starvation protein CstA |
Protein accession | YP_003304244 |
Protein GI | 268679813 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0310498 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACAGGAC AAAGTACCAG CGCATCTTCA AAGATCATTT GGCTATTTAT AGCCATATTA GGCGCTTTTG CACTCGGATA TGTTGCACTA AATCGTGGTG AGACGATTAA TGCGATGTGG ATTCTCACTG CTTCGGTGTG TGTATATTTG ATTGGGTATC GCTACTACAG TCTTTACATT GCCAATACGG TATTAAAAGT TGATAATACC CGTATGACCC CAGCGTTTCG TCATAATGAC GGATTGGATT TTGTACCAAC CAATAAAGTC ATTTTATTTG GTCACCACTT TGCAGCGATT GCAGGTGCTG GTCCGTTAGT TGGTCCTGTA CTTGCAGCAC AACTAGGTTA TTTGCCAGGT ATGCTATGGC TTTTAGCGGG TGTAATTATC GCAGGTGCAG TTCAAGATTA TATGGTGTTA TTTGTTTCCA CGAGAAGAGA CGCACGCTCT TTAGGTGAAT TAGTCAAAGC AGAACTAGGC ACGCTCCCTG GTATCATTGC GCTCGTTGCG TGCTTTATGA TTATGGTGAT TATCTTAGCC GTTTTAGCAA TGGTTGTTGT CAAAGCTCTT ACCCATAGTC CTTGGGGAAC CTTTACCGTT GCGTTTACCA TTCCTCTGGC TCTTTTTATG GGCGTTTACC TACGTTATAT CCGTCCAGGT CGCATTTTAG AGATTTCTCT TGTCGGCTTT GTAGGCTTAA TTGCAGGTAT TATGTTAGGA GGACAAGTTG CCGCAAGTCC AACATGGGCA CCTTACTTTG ATCTTAGCGG TATTGCGCTA ACATGGTCAT TGATTGCTTA TGGTTTTATT GCAGCAGTAC TTCCGGTTTG GTTACTTTTA GCTCCTCGTG ATTACCTCTC TACTTTCTTA AAAATTGGTG CTATTGTTGG TCTTGCTATT GGTATTGTTA TTTTAATGCC TGATATGAAA ATGCCAGCCA TGACCAAATA CGCTTTTGGT GACCACGGTC CAGTATGGAC AGGAAGTCTC TTTCCTTTCT TGTTTATTAC GATTGCGTGT GGTGCGGTAT CAGGATTTCA TGCCCTTATC TCTTCAGGTA CAACCCCTAA AATGCTTGCC AATGAAGAAC AAGCACGTTT TATCGGTTAT GGTGCGATGT TGATGGAATC TTTTGTTGGT ATGATGGCAT TGATTTCTGC GTCTATTATC GACCCAGGTG TCTACTTTGC GATGAACTCC CCACTTGCAG CGCTGAATCC AACAGGTTTA GCTGACGTTG CTGCTGCTGC TTCTGCAACA GTGAGCCAAT GGGGCTTTGT CATTACCCCT GATGTTCTAA AGCAACTGGC TGTTGATGTG GGCGAGAGTA GTATTATTTC TCGTGCCGGT GGTGCTCCAA CACTCGCTGT AGGTATGGCT CAAATTCTTC ATGGTGCTCT TGGTGGTCTT GGTTCTATGT CCTTTTGGTA CCACTTCGCC ATTCTTTTTG AAGCCCTTTT TATCTTAACA GCAGTCGATG CAGGTACCCG TGCCGCACGC TTTATGTTAC AAGATTTGCT AGGACTTATT AATCCAAATC TTAAAAAAAC AGACTCACTT TTTGCTAACC TTTTAGCAAC AGGTTTAGTC GTTGCATCAT GGGGATACTT CCTCTATGTA GGCGTTGTCG ATCCATTGGG TGGTATTAAT ACGTTATGGC CTCTCTTTGG TATTACCAAT CAAATGTTGG CGGCTATTGC CTTGATGTTA TGTACGGTTG TGCTCTTTAA AATGAAACAC CAAATGTACG CATGGGTCAC CATCGTTCCT GCGACATGGT TGGTCATTTG TACGATGAGT GCTGGTTGGT ATAAAGCATT TAGTGCAGAT CCTGCGATTG GATTCTTCGC TAAAGCAAAT CAACTCAAAG ACCTTTTAAC AAGTGGAAAC TTCAAACCCA ATGCCATTTT TAAATCTCAA GAGGCGGTTG AGCGTGTTAT TTTCAATAAC CAAATTGACG GTATTTTGAT TGTTTTCTTT ATGATTGTTG TGGTTACGAT GATTTACTTC ACCGTTCAAG CATGCTTAAA AGCACTTCAA ACCGATAAAC CAACCGTTGT TGAAGTTCCT TATGCTCCAT TTCCTGCAAA CGCAGATGAA ATTTTAAGAG GTGCGGTACA CTAA
|
Protein sequence | MTGQSTSASS KIIWLFIAIL GAFALGYVAL NRGETINAMW ILTASVCVYL IGYRYYSLYI ANTVLKVDNT RMTPAFRHND GLDFVPTNKV ILFGHHFAAI AGAGPLVGPV LAAQLGYLPG MLWLLAGVII AGAVQDYMVL FVSTRRDARS LGELVKAELG TLPGIIALVA CFMIMVIILA VLAMVVVKAL THSPWGTFTV AFTIPLALFM GVYLRYIRPG RILEISLVGF VGLIAGIMLG GQVAASPTWA PYFDLSGIAL TWSLIAYGFI AAVLPVWLLL APRDYLSTFL KIGAIVGLAI GIVILMPDMK MPAMTKYAFG DHGPVWTGSL FPFLFITIAC GAVSGFHALI SSGTTPKMLA NEEQARFIGY GAMLMESFVG MMALISASII DPGVYFAMNS PLAALNPTGL ADVAAAASAT VSQWGFVITP DVLKQLAVDV GESSIISRAG GAPTLAVGMA QILHGALGGL GSMSFWYHFA ILFEALFILT AVDAGTRAAR FMLQDLLGLI NPNLKKTDSL FANLLATGLV VASWGYFLYV GVVDPLGGIN TLWPLFGITN QMLAAIALML CTVVLFKMKH QMYAWVTIVP ATWLVICTMS AGWYKAFSAD PAIGFFAKAN QLKDLLTSGN FKPNAIFKSQ EAVERVIFNN QIDGILIVFF MIVVVTMIYF TVQACLKALQ TDKPTVVEVP YAPFPANADE ILRGAVH
|
| |