Gene Sdel_0678 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSdel_0678 
Symbol 
ID8592210 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSulfurospirillum deleyianum DSM 6946 
KingdomBacteria 
Replicon accessionNC_013512 
Strand
Start bp670248 
End bp671891 
Gene Length1644 bp 
Protein Length547 aa 
Translation table11 
GC content39% 
IMG OID 
ProductLytic transglycosylase catalytic 
Protein accessionYP_003303749 
Protein GI268679318 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.906307 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCACTTTA AACAGACTTT TGGCACGCTG TTTTGCCTCC TTTTCTTGCA TCCATTGTTT 
GCTAGTCAAA ATGTCGATTT TGCTTTTTTT CAAGACAAAC CGCAATCCTT AGCCAAAGAT
TTTTATATCT ACGAATATCT TCAAAGTGAT CGGGTAACAC CTAAAGAAGC CACGATGCTT
TTTGGGATGG TGCATACCAT GAATCTTCGT TTTTTTCATC TCTTTGCTAA AAAAATGGAA
AATCCTGAGT TTCAAAAAAT CTCTTACTGT ATGGATTTGG ATATTACCCG TTTAATGAAA
GAGGACGATG CGTGTTTAAA TATTGGTATT AACAGCGCAA AACTCACCTC TTTACCCAAA
AGCCAACTTG CAAACATTAA ATCACGATTA AGCCCGAATA CTCCTCTGCT TAAACTGTTC
CCGATTATGG AGAGTGACAA TGTCTATGAA AGTGCTCTAA AAAGTGATGC TCAAACTTTT
TTAACCCTTT ATACAGGGAG TATTTCGGCG TATAAATTGG CTCATTTCAA CCAAAATATA
CTTCCAAAAG CTTTCCTAGA CTCCCTGTCT CTCTCGCCTA AATTTAATGC CATGGTTTAT
TCTACCGTTC AAAATGATAA GTTAGATATG GTGCAAAAAT CACTCTTATA TGTCACGCCC
TCTTTACATG TAAACGCAAA GTCACTCTTT TACTTAGGAC TCAATGCGCT TAAATACCAT
GAAAACAACA AAGCGATTGC CTTTTTTGAA CAATCCATTG AACGTGCAAA GAAACAAGAA
GAGAAAGACA GAGCCCTCTT TTGGCAATAC CTTATTAGCA ATAATGCTTC GTATCTGCAA
AAACTTTCCC AAAGCAGTGA CATTAACATC TACTCACTGT TTGCACTTGA AACACTATCG
CTACCTTTAC ACAATGTCGT CTCTCCACAC CTAGAAGGAA CCCATCCCTA TTTTGAAGTG
AGTGATCCTT TTGCGTGGAT AGAGATTATG CAACGTGTCT ATCATATGAG TGCGCAAGAG
ACCGAAATCT TCGCACAAAG CTTTAAATAC GCCAATACGC TACCACACTA TAGCTATCTT
ATGGAGCGTG CGACACGTTA TAGCAAACAT TACTATCCCA TTCCTTACCC TGAGGAAATT
GCAGATTATT CTACACACAG ACAAGCGCTT ATGTTAGCGA TTGCTCGTCA AGAGAGTCGT
TTTTTACCCT CCGTGGTTTC CACCTCGTAT GCACTAGGCA TGATGCAGTT TATGCCTTTT
GTCGCACGGG ATATCGCTAA AAAAGAGAAA CTCGAAGATT TTAATATCGC CGCTATGTTT
AATCCAAAAG TGGCTTATCT TTTTGGGAAT ATTCATCTTA ATTTTTTAGA GCGAAACCTC
ATCAGTCCTC TCTTTGTCGC TTATGCTTAT AATGGGGGAA TTGGGTTTAC CAAACGGCAC
CTTCAAGCAG GTGCTTTTTC AGCGGGGATG TATGAGCCAT TTTGGAGTAT GGAGACGATG
ATTAATGAAG AGAGCCGTGA ATACGGCAAA AAAGTACTCG CCAACTATGT CGTTTATCGT
CATCTTTTAG GCGATGACGT CTCTATTAAA AATCTTTTTG AAAAACTACT GATACCCTCT
GCGAGTGATC GCTTTCGAAA CTAA
 
Protein sequence
MHFKQTFGTL FCLLFLHPLF ASQNVDFAFF QDKPQSLAKD FYIYEYLQSD RVTPKEATML 
FGMVHTMNLR FFHLFAKKME NPEFQKISYC MDLDITRLMK EDDACLNIGI NSAKLTSLPK
SQLANIKSRL SPNTPLLKLF PIMESDNVYE SALKSDAQTF LTLYTGSISA YKLAHFNQNI
LPKAFLDSLS LSPKFNAMVY STVQNDKLDM VQKSLLYVTP SLHVNAKSLF YLGLNALKYH
ENNKAIAFFE QSIERAKKQE EKDRALFWQY LISNNASYLQ KLSQSSDINI YSLFALETLS
LPLHNVVSPH LEGTHPYFEV SDPFAWIEIM QRVYHMSAQE TEIFAQSFKY ANTLPHYSYL
MERATRYSKH YYPIPYPEEI ADYSTHRQAL MLAIARQESR FLPSVVSTSY ALGMMQFMPF
VARDIAKKEK LEDFNIAAMF NPKVAYLFGN IHLNFLERNL ISPLFVAYAY NGGIGFTKRH
LQAGAFSAGM YEPFWSMETM INEESREYGK KVLANYVVYR HLLGDDVSIK NLFEKLLIPS
ASDRFRN