Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sdel_0678 |
Symbol | |
ID | 8592210 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sulfurospirillum deleyianum DSM 6946 |
Kingdom | Bacteria |
Replicon accession | NC_013512 |
Strand | - |
Start bp | 670248 |
End bp | 671891 |
Gene Length | 1644 bp |
Protein Length | 547 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | |
Product | Lytic transglycosylase catalytic |
Protein accession | YP_003303749 |
Protein GI | 268679318 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.906307 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCACTTTA AACAGACTTT TGGCACGCTG TTTTGCCTCC TTTTCTTGCA TCCATTGTTT GCTAGTCAAA ATGTCGATTT TGCTTTTTTT CAAGACAAAC CGCAATCCTT AGCCAAAGAT TTTTATATCT ACGAATATCT TCAAAGTGAT CGGGTAACAC CTAAAGAAGC CACGATGCTT TTTGGGATGG TGCATACCAT GAATCTTCGT TTTTTTCATC TCTTTGCTAA AAAAATGGAA AATCCTGAGT TTCAAAAAAT CTCTTACTGT ATGGATTTGG ATATTACCCG TTTAATGAAA GAGGACGATG CGTGTTTAAA TATTGGTATT AACAGCGCAA AACTCACCTC TTTACCCAAA AGCCAACTTG CAAACATTAA ATCACGATTA AGCCCGAATA CTCCTCTGCT TAAACTGTTC CCGATTATGG AGAGTGACAA TGTCTATGAA AGTGCTCTAA AAAGTGATGC TCAAACTTTT TTAACCCTTT ATACAGGGAG TATTTCGGCG TATAAATTGG CTCATTTCAA CCAAAATATA CTTCCAAAAG CTTTCCTAGA CTCCCTGTCT CTCTCGCCTA AATTTAATGC CATGGTTTAT TCTACCGTTC AAAATGATAA GTTAGATATG GTGCAAAAAT CACTCTTATA TGTCACGCCC TCTTTACATG TAAACGCAAA GTCACTCTTT TACTTAGGAC TCAATGCGCT TAAATACCAT GAAAACAACA AAGCGATTGC CTTTTTTGAA CAATCCATTG AACGTGCAAA GAAACAAGAA GAGAAAGACA GAGCCCTCTT TTGGCAATAC CTTATTAGCA ATAATGCTTC GTATCTGCAA AAACTTTCCC AAAGCAGTGA CATTAACATC TACTCACTGT TTGCACTTGA AACACTATCG CTACCTTTAC ACAATGTCGT CTCTCCACAC CTAGAAGGAA CCCATCCCTA TTTTGAAGTG AGTGATCCTT TTGCGTGGAT AGAGATTATG CAACGTGTCT ATCATATGAG TGCGCAAGAG ACCGAAATCT TCGCACAAAG CTTTAAATAC GCCAATACGC TACCACACTA TAGCTATCTT ATGGAGCGTG CGACACGTTA TAGCAAACAT TACTATCCCA TTCCTTACCC TGAGGAAATT GCAGATTATT CTACACACAG ACAAGCGCTT ATGTTAGCGA TTGCTCGTCA AGAGAGTCGT TTTTTACCCT CCGTGGTTTC CACCTCGTAT GCACTAGGCA TGATGCAGTT TATGCCTTTT GTCGCACGGG ATATCGCTAA AAAAGAGAAA CTCGAAGATT TTAATATCGC CGCTATGTTT AATCCAAAAG TGGCTTATCT TTTTGGGAAT ATTCATCTTA ATTTTTTAGA GCGAAACCTC ATCAGTCCTC TCTTTGTCGC TTATGCTTAT AATGGGGGAA TTGGGTTTAC CAAACGGCAC CTTCAAGCAG GTGCTTTTTC AGCGGGGATG TATGAGCCAT TTTGGAGTAT GGAGACGATG ATTAATGAAG AGAGCCGTGA ATACGGCAAA AAAGTACTCG CCAACTATGT CGTTTATCGT CATCTTTTAG GCGATGACGT CTCTATTAAA AATCTTTTTG AAAAACTACT GATACCCTCT GCGAGTGATC GCTTTCGAAA CTAA
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Protein sequence | MHFKQTFGTL FCLLFLHPLF ASQNVDFAFF QDKPQSLAKD FYIYEYLQSD RVTPKEATML FGMVHTMNLR FFHLFAKKME NPEFQKISYC MDLDITRLMK EDDACLNIGI NSAKLTSLPK SQLANIKSRL SPNTPLLKLF PIMESDNVYE SALKSDAQTF LTLYTGSISA YKLAHFNQNI LPKAFLDSLS LSPKFNAMVY STVQNDKLDM VQKSLLYVTP SLHVNAKSLF YLGLNALKYH ENNKAIAFFE QSIERAKKQE EKDRALFWQY LISNNASYLQ KLSQSSDINI YSLFALETLS LPLHNVVSPH LEGTHPYFEV SDPFAWIEIM QRVYHMSAQE TEIFAQSFKY ANTLPHYSYL MERATRYSKH YYPIPYPEEI ADYSTHRQAL MLAIARQESR FLPSVVSTSY ALGMMQFMPF VARDIAKKEK LEDFNIAAMF NPKVAYLFGN IHLNFLERNL ISPLFVAYAY NGGIGFTKRH LQAGAFSAGM YEPFWSMETM INEESREYGK KVLANYVVYR HLLGDDVSIK NLFEKLLIPS ASDRFRN
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