| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3972 |
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| Symbol | |
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| ID | 3967276 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 5003330 |
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| End bp | 5004265 |
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| Gene Length | 936 bp |
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| Protein Length | 311 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637923069 |
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| Product | F0F1 ATP synthase subunit A |
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| Protein accession | YP_529439 |
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| Protein GI | 90023612 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0356] F0F1-type ATP synthase, subunit a |
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| TIGRFAM ID | [TIGR01131] ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes) |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.000792431 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.307895 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCGAGTA GCGAAGAGTT AACAGCAACG GGCTATATTC AGCACCATTT GCAAAACCTT
ACTTACGGCA AACTTCCTGC CGGTTATGTG CGTCACAATG CCGACGGTAC CCATACCGAG
CTAGCGGCTA ATACGTGGAC ATTTGCCCAC ACTGCACAAG AAGCCAAAGA TATGGGCTTT
ATGGCAGTGC ATGTAGATAC CCTGGGTTGG GGTATTTTCT TGGCGCTGTT GTTGGGTTTT
ATTTTCCGCT CAGCGGTTAA AAAAGCGCAC ACCGGCAAGC CAAGCGGCCT ACTCAGCTTT
GTTGAGTTTT TGGTTGAAGG CATTAACAGC GTTGTTAAAG ATATTTTCCA TCATAAAAAC
CGCTTGATCG CACCAATGGG TTTAACGATC TTTAGCTGGG TATTTATGAT GAACCTTATG
GATTTAATCC CCGTAGACTG GCTGCCTATG CTGGCGCAAG TTGTTACTGG CGATTCCCAT
ACCTTCTTCA AAGTAGTTCC CACAACCGAC CCCAATGCCA CATTGGGTAT GGCGTTTACT
GTTTTTGCTT TGATGATTAT GTTCAGCATT AAAGAAAAAG GCGCTTTAGG GTTTGTAAAA
GAGCTAACTT GCCACCCCTT CTTTGCACCA AAGAAATTGT GGTACCTCAA CATACTTCTT
ATACCTGTAA ACACCATTTT GGAAACCGTT GCGCTTATTG CTAAGCCTAT CTCGCTTGGC
TTGCGTTTGT TCGGCAACAT GTACGCAGGT GAAATGATCT TTATCCTTAT CGCACTTCTA
TTCAGTGTTG GTTTGGTAAT GGGTTTTGTT GGCGGTGTAT TGCAGTGGGC GTGGGCGGTA
TTCCACATTC TTGTCATTAC GTTGCAAGCA TTTATCTTCA TGGTTCTCAC CACGGTTTAT
ATGGCCATGG CACACGATAA CCACGACGAG CACTAG
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| Protein sequence | MASSEELTAT GYIQHHLQNL TYGKLPAGYV RHNADGTHTE LAANTWTFAH TAQEAKDMGF
MAVHVDTLGW GIFLALLLGF IFRSAVKKAH TGKPSGLLSF VEFLVEGINS VVKDIFHHKN
RLIAPMGLTI FSWVFMMNLM DLIPVDWLPM LAQVVTGDSH TFFKVVPTTD PNATLGMAFT
VFALMIMFSI KEKGALGFVK ELTCHPFFAP KKLWYLNILL IPVNTILETV ALIAKPISLG
LRLFGNMYAG EMIFILIALL FSVGLVMGFV GGVLQWAWAV FHILVITLQA FIFMVLTTVY
MAMAHDNHDE H
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