| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3888 |
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| Symbol | |
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| ID | 3967113 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 4906375 |
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| End bp | 4908591 |
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| Gene Length | 2217 bp |
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| Protein Length | 738 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 637922985 |
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| Product | catalase |
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| Protein accession | YP_529355 |
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| Protein GI | 90023528 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0376] Catalase (peroxidase I) |
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| TIGRFAM ID | [TIGR00198] catalase/peroxidase HPI |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.691403 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAACCCT TATTCCCCAA GAGGTTACTT TCGATTGCTG TTTTGTGTGT GGCAAGCGCC
ACAGCGCAGG CAGACACGGG TATGAACCCC GATAACGATT ACTGGTGGCC CAATCGGTTA
AGCTTGGAGC CCTTGCGCGA TTCTTCGCTT TCTGCAGACC CCCGCGGTGC AAACTTCGAC
TATAACGAAG CATTGAAAGA TCTAGATGTA GAGGCTTTAA AAAAAGATCT TAAACAAGTG
ATGACCGCAT CACAGGATTG GTGGCCCGCA GACTATGGCC ACTATGGCCC ATTCTTTATC
CGTCTGTCGT GGCATGCGGC GGGTACTTAC CGCATGATTG ATGGTCGTGG CGGTGCCGAT
GGTGGCATGC AGCGTTTTGC TCCTTTAAAC AGTTGGCCAG ATAACGCCAG TTTGGATAAA
GCCAGACGCC TACTGCAACC CATTAAACAG AAATACGGCA ACAACTTGTC TTGGTCGGAT
CTGTTGGTAT TAGCCGGTAC TATCGGCATG GAAGATATGG GGTTCCCGAT TGTTGGTTTT
GCCTTTGGTC GCGACGATGA GTGGGAGCCA GAGGAAGTAA ACTGGGGGCC AGAGGGACAG
TGGTTAACTG ATAGGCGTCA CTCTGGTGAT CGCAAATTAG ATAAGCCTTT TGGCGCAACC
GAAATGGGCC TTATTTACGT CAACCCAGAG GGCCCTCATG GCAACCCAGA CCCAATTGCT
GCGGCACACG ATATTCGTCA GGCTTTTGGC CGCATGGGTA TGAGCGATGA AGAAACCGTT
GCGCTTATTG CTGGTGGCCA CACCTTTGGT AAAGCGCACG GTGCACACAA GCCATCCGAT
TGTGTGGGTG CCGACCCAGA AGCTGCCAGT ATGGAAGAGC AAGGACTCGG TTGGACCAAC
AAATGCGGCA AGGGTAACGC CGAAGATACA GTTACTAGTG GCCTAGAAGG TGCTTGGACC
GTAAGCCCTG CCGAGTGGAC ACACAACTTT TTACAGAACC TATACGCCTT TGAGTGGGAA
CTTACTACTA GCCCTGCGGG TGCCAAGCAG TGGGTACCTA AAGGCGGCGC TGCGACTAAC
ATGGTGCCCG ATGCCCACGA CAGCAGTAAG CGTCACGCGC CTATTATGTT AACTACAGAC
TTGGCGCTGA AGGAAGATCC CGCCTACCGC AAAATTACTC AGCGCTGGTT GGAAGACCCC
GAGGAATTTA CCCGTGCGTT TGCGCGCGCC TGGTTCAAGC TCACTCACCG CGATATGGGC
CCAGTGTCTC GTTATAAAGG TGAGCTGGTG CCGAGTGATA CTTTTGTGTG GCAAGACCCA
GTGCCCGTTG CCGATTACAA ACAAATCGGT GAGCGCGATG TTAAAAAGCT AAAAGCAGCT
ATTTTGGATT CCGGTTTAAG TACCAGTGAT TTGGTAAAAA CCGCATGGGC ATCGGCAGCG
TCTTTCCGCA CAACAGATAT GCGCGGTGGT GCGAACGGTG CGCGAATTCG TTTGGCCCCA
CAAAAAGATT GGGCCGTAAA CCAGCCGCAG GACTTGCAGC GCGTATTGAA GGTGCTCGAA
GGTGTGCAGA GAGAATTCAA TAAAAAATCA CGTAAAACAA AAGTCTCGCT TGCGGATGTA
ATTGTTTTGG GTGGCGCCGC AGCCATTGAG CAGGCCGCTA AAAAAGCGGG CCATAAGGTT
GAGGTGCCCT TTTTCCCTGG TCGCACCGAC GCCAGCCAAG AAATGACCGA CGTAAGTACT
TTTGCTTGGT TGGAGCCTAA GTCTGACGGG TTCCGAAATT TCCACGCTGA GGGCTACAAG
CGCAACCCAG CCGAAGCGCT GGTTGAACGC GCGGCGCTAT TGGGTTTAAC CGCGCCAGAA
ATGACTGCAT TGGTAGGTGG CTTACGCGTA TTGCAAGCTA ATGCCGACGG CAGCCAACAC
GGTGTGTTTA CCGACAACCC CGGCAGTTTG ACTAACGACT TTTTTGTAAA CTTGGTGGAT
ATGTCTACCG TATGGAAAAA GTCTGACACC GAAGCGGGTT TGTACAAAGG GCTGGATCGA
AACTCGGGTA AAGTGAAGTG GACTGCCACC TCCGCCGACC TGATTTTTGG TTCTAACTCA
GAGCTGCGCG CCATAGCCGA GTACTACTCA CAGAGTGATA GCCAAAAAAC TTTTGTACAG
GATTTTATAA ACGCTTGGAG CAAGGTGATG ACCGCAGACA GGTTTGATCT AAAATAA
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| Protein sequence | MEPLFPKRLL SIAVLCVASA TAQADTGMNP DNDYWWPNRL SLEPLRDSSL SADPRGANFD
YNEALKDLDV EALKKDLKQV MTASQDWWPA DYGHYGPFFI RLSWHAAGTY RMIDGRGGAD
GGMQRFAPLN SWPDNASLDK ARRLLQPIKQ KYGNNLSWSD LLVLAGTIGM EDMGFPIVGF
AFGRDDEWEP EEVNWGPEGQ WLTDRRHSGD RKLDKPFGAT EMGLIYVNPE GPHGNPDPIA
AAHDIRQAFG RMGMSDEETV ALIAGGHTFG KAHGAHKPSD CVGADPEAAS MEEQGLGWTN
KCGKGNAEDT VTSGLEGAWT VSPAEWTHNF LQNLYAFEWE LTTSPAGAKQ WVPKGGAATN
MVPDAHDSSK RHAPIMLTTD LALKEDPAYR KITQRWLEDP EEFTRAFARA WFKLTHRDMG
PVSRYKGELV PSDTFVWQDP VPVADYKQIG ERDVKKLKAA ILDSGLSTSD LVKTAWASAA
SFRTTDMRGG ANGARIRLAP QKDWAVNQPQ DLQRVLKVLE GVQREFNKKS RKTKVSLADV
IVLGGAAAIE QAAKKAGHKV EVPFFPGRTD ASQEMTDVST FAWLEPKSDG FRNFHAEGYK
RNPAEALVER AALLGLTAPE MTALVGGLRV LQANADGSQH GVFTDNPGSL TNDFFVNLVD
MSTVWKKSDT EAGLYKGLDR NSGKVKWTAT SADLIFGSNS ELRAIAEYYS QSDSQKTFVQ
DFINAWSKVM TADRFDLK
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