| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3865 |
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| Symbol | |
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| ID | 3967032 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 4871727 |
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| End bp | 4872332 |
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| Gene Length | 606 bp |
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| Protein Length | 201 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637922962 |
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| Product | hypothetical protein |
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| Protein accession | YP_529332 |
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| Protein GI | 90023505 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0272] NAD-dependent DNA ligase (contains BRCT domain type II) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.62314 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGATATTT TTACTAGATT CAACAGAAAT AAAATAGCCG ATAGGCAATT AGATACCCTT
ATTGGTTTGA GTAAAGGCAT TGCCGCCGAT GGTAATGTTA ACCAAGCCGA AGCGGAGTTT
TTACAGAGCT GGCTGGTTCA AAACGGTCAA TCTGAACACC CTGTTATTCT CAATCTACTC
AGTAAAGTTT CCGAAGCCCT AGCCGACGGC GTGCTAGACG AAGAAGAATC GCGCGAGTTA
CTCACTATAC TTCGTACGAT TTCTGGTGAA AGCAGTGAAA TTGGCGAAGT AGCAAAAACG
TCCGCTTTGC CTCTATGCTC CCCTGCACCT AAATTGGAAT TTGCGGGTAA ATCCTATTTG
TTTACTGGCA CCTGCGCCTA CGGCAACCGA AAGCAGTGCC AAGCGGCTAT CGAAACACTT
GGCGGCGTAG TGGCTAGTAG CGTAACAAAA AAATTAGATG TGCTTGTATT GGGTACCTAC
GTTACCGAAA GTTGGGCACA CGAAACATTT GGTCGAAAAA TAGAAAAGGC AATGGCGTAT
AGAGAGTCTG GTTTACCTAT TGCAATTGTT AGCGAGCAGC ATTGGGTGAA TGAGGCTGGG
GTTTAG
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| Protein sequence | MDIFTRFNRN KIADRQLDTL IGLSKGIAAD GNVNQAEAEF LQSWLVQNGQ SEHPVILNLL
SKVSEALADG VLDEEESREL LTILRTISGE SSEIGEVAKT SALPLCSPAP KLEFAGKSYL
FTGTCAYGNR KQCQAAIETL GGVVASSVTK KLDVLVLGTY VTESWAHETF GRKIEKAMAY
RESGLPIAIV SEQHWVNEAG V
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