| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3822 |
|---|
| Symbol | |
|---|
| ID | 3966933 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharophagus degradans 2-40 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007912 |
|---|
| Strand | - |
|---|
| Start bp | 4822793 |
|---|
| End bp | 4823329 |
|---|
| Gene Length | 537 bp |
|---|
| Protein Length | 178 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 637922919 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_529289 |
|---|
| Protein GI | 90023462 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG5395] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTAATCG CCCTATTAAG TTACTTCGGT AGTCATCAAG TAGGTTTAAT TCACACTCTT
TGTGCTGTGC TAGCGCTGTT AGTGGGTTGG CGGGTACTTG CAAAGCCTAA AGGTGGCAAA
AGCCACAAGC TCTGGGGTTT TAGCTATGTC ATGCTAATGC TGGCCCTTAA TATTTCGGCT
TTATTTATTC ATAACTTGTT TGTATTCGGG CCGTTTCACA TAGCGGCTTT GTTTTCTCTT
ATTACGGTAT GCATAGGTAT TGTGGCGGCT TTACCGCACA CGCCGCATGC ATTGCGTTTG
CATTTTGACT GTATGAGTTG GTCGTATGTT GGTTTAATGG CTGCTTTTTT CTCGGAAGGT
ATTACAAGGC TACCGTGGCT TGCAAGTGGC GCAGCGTTTA CAGGCTCTGT TATATTGATG
AGCTTAATTA CCTGCGTAAT TGGTGGCATT ACCATTCATT TGCGTCGGCC AAAATGGCAA
AAGTTAACAA CAGCGTACAA AAAAGAATTT ATCGGCACAC CTCATAAAAG TATTTAG
|
|---|
| Protein sequence | MLIALLSYFG SHQVGLIHTL CAVLALLVGW RVLAKPKGGK SHKLWGFSYV MLMLALNISA
LFIHNLFVFG PFHIAALFSL ITVCIGIVAA LPHTPHALRL HFDCMSWSYV GLMAAFFSEG
ITRLPWLASG AAFTGSVILM SLITCVIGGI TIHLRRPKWQ KLTTAYKKEF IGTPHKSI
|
|---|
| |